FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806336

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806336
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences158875
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG103966.543509047993706No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT89465.630841856805665No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT81845.151219512195122No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG65844.1441384736428No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT51213.2232887490165223No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT49773.1326514555468137No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT47332.9790715971675845No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT41892.6366640440597955No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG31681.9940204563335957No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT31101.9575137686860742No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT28841.8152635719905588No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT24051.5137686860739576No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC20091.264516129032258No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT20051.2619984264358775No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG18981.1946498819826907No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG15670.9863099921321793No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT15590.9812745869394177No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT15330.9649095200629426No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC15230.9586152635719906No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT14510.9132966168371361No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT14260.897560975609756No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT13840.8711250983477578No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT13650.8591660110149489No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG13300.8371361132966169No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG13180.8295830055074744No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC12160.765381589299764No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA11940.7515342250196695No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT11730.7383162863886703No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG11430.7194335169158143No Hit
CATAGAACTGTCCCCTACTTTTCACCACATAGAACTTTCCCACCGCCCTT11260.7087332808811959No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC11140.7011801730920535No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCATAGATGTGGTTGCATGG10890.6854445318646735No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC9980.6281667977970102No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT9780.6155782848151061No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC9270.583477576711251No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT9170.5771833202202991No Hit
CATAGAACTGTCCCCTACTTTTCACCAACACTGCTCACGATGGTATTACA8930.5620771046420141No Hit
CATAGAACTCTTACCCTTTTGCCAGGATGCCAGGTTTCTGGGTTTTCTTT7890.49661683713611326No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC7730.48654602675059005No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG7620.47962234461054293No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA7300.45948072383949645No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT7300.45948072383949645No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT7170.4512981904012589No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT5980.37639653815893No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG5960.3751376868607396No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC5930.37324940991345396No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT5860.36884343036978756No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT5690.35814319433516917No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA5590.3518489378442171No Hit
CATAGAACTGACCATACACTTGCCCTGTCTCATAGAACTGTCCTCTTCAC5520.3474429583005507No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT5470.34429583005507475No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA5470.34429583005507475No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT5290.3329661683713611No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGGAGCTGAGAAGGTAGGTGGCTT5270.33170731707317075No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTCCAAGGTCAAGGGC5230.32918961447678996No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGACACTTGAAAGCTCCCTGGA5170.3254130605822187No Hit
CATAGAGCAGAATTTTGGGGAGAGGGAGATGAGGAGTTGACAAACGACAG5160.32478363493312357No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT5140.3235247836349331No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT5080.31974822974036193No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC5020.3159716758457907No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA4950.31156569630212433No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGTGTGTGTGTCTCTCCCTCTCTC4860.3059008654602675No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGACTGGGTCCCAAAGTAGGCAAT4730.2977183320220299No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTTTATGACAGACCAAGGTCAAGG4590.28890637293469706No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT4470.2813532651455547No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC4460.2807238394964595No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTAATGTTTGCTATTACGAGGATG4280.2693941778127459No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGACTTCAGGGCTGCATGGTGACT4010.2523996852871755No Hit
CATAGAACCTCAAGCCGGAAAACCTTACACTGAACGAAATTTAGGTGAGC3770.23729346970889062No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGACTTTTCTATGTGTAGAACAGG3760.23666404405979546No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT3650.22974036191974823No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTGGTCTCATAGATGGGTCCC3630.22848151062155783No Hit
CATAGACCAGGACAATCACAGGGCACTGGGGAATTGCACAGGACATTGGG3610.22722265932336744No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA3570.22470495672698662No Hit
CATAGACACTTGACCATGCCCTTGTTGACACTTGAAAGCTCCCTGGATCT3540.22281667977970102No Hit
CATAGACCAGGACAATCACAGGGCATTCTTTCTCCAGACCTTCATCTATG3460.21778127458693944No Hit
CATAGAGTTCCAGCAAAATGAAGGGGATGGGTCCCAAAGTAGGCAATTCT3450.21715184893784423No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG3360.21148701809598744No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3320.2089693154996066No Hit
CATAGAGGGATGGTATCAGAGAAGGCTAGTTGGGTGCTCTATGTGTAGAA3320.2089693154996066No Hit
CATAGACACTTGACCATGCCCTTGTTCAGACACTTGAAAGCTCCCTGGAT3250.2045633359559402No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3190.200786782061369No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC3160.1988985051140834No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT2940.185051140833989No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT2930.18442171518489378No Hit
CATAGATGGGTCCCATTCTGTTTGCAATTCTATGCAGAGTGGGAGTCATT2820.17749803304484657No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT2680.16868607395751378No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG2630.16553894571203778No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGTTCTGTCTATGTGACAGGGGTG2590.16302124311565697No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT2520.15861526357199054No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAGGTGGCTTCTGGTGCATCTA2500.15735641227380015No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT2490.15672698662470497No Hit
CATAGACAGGGGCCAGAACTCCTAAGTCTCATAGACAGGGGTGTGGTGTT2480.15609756097560976No Hit
CATAGAGAAGGAAAACTGGGCTGTGGACAGGGGTGTGGTGTTCTGTCTAT2420.15232100708103855No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGCTCCTCTTCTCTTCCCTC2390.15043273013375297No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGTTCTGTCTATGTGTAGGACAGG2270.14287962234461055No Hit
CATAGAACTAGTTCCAGCACCACCAGCACCTTTTCCCTGCAGAACCAGGG2240.14099134539732494No Hit
CATAGAACTCTTACCCTTTTGCCAGGAGTTGACAAACGACAGCTTCTATG2240.14099134539732494No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTGACGGGCAGTGACTGAGAGGCA2230.14036191974822976No Hit
CATAGACACTTGACCATGCCCTTGTTCCTCATAGATGGGTCCCAAAGTAG2150.13532651455546812No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA2120.13343823760818252No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA2070.13029110936270652No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG1990.12525570416994494No Hit
CATAGACTTGTTGCCGAGACTGGAGTACAGTGGCGTGATCTTGGCTCACT1810.11392604248623131No Hit
CATAGACAGGGGCCAGAACTCCTAAGCTTGGTCTCATAGACAGGGGTGTG1810.11392604248623131No Hit
CATAGATGGGTCCCATTCTGTTTGCAATGGGTCCCAAAGTAGGCAATTCT1810.11392604248623131No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTGTCCTCTTCACCTCCCAGATCT1780.11203776553894572No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG1780.11203776553894572No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT1760.11077891424075531No Hit
CATAGACACTTGACCATGCCCTTGTTCCATAGACACTTGAAAGCTCCCTG1740.10952006294256492No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACACCAAAAGCACAAGTTCTAT1730.10889063729346972No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG1720.1082612116443745No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAACCATGTCGTCAGTGTGCG1610.1013375295043273No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA1590.1000786782061369No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)