FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806338

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806338
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences216975
Sequences flagged as poor quality0
Sequence length150
%GC34

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG116385.363751584283904No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT96834.462726120520797No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT81283.746053692821753No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG76673.5335868187579216No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT71343.2879363982025582No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT60672.7961746745016707No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT56842.6196566424703307No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT56042.5827860352575183No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT50902.3458923839151975No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG38521.7753197372969236No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT37231.7158658831662634No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT26551.2236432768752161No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC26181.2065906210392903No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT25231.1628067749740754No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT24841.1448323539578291No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT24511.129623228482544No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG24101.1107270422859776No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT23571.0863002650074893No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG22581.0406728885816336No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC22171.0217767023850675No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC22151.020854937204747No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG21680.9991934554672198No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT20700.9540269616315245No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT18550.8549372047470907No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT18470.8512501440258095No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT16710.7701348081576218No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT16420.7567692130429773No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG16180.7457080308791335No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT15540.7162115451088835No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG13600.6268003226178132No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT13360.6157391404539694No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACCTGTGTGTGTAAGTGGGTCTAT13290.6125129623228482No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT12980.5982256020278834No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA12950.5968429542574029No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT12720.5862426546837193No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT12650.5830164765525983No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA12630.582094711372278No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG12630.582094711372278No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC12620.5816338287821178No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC11830.5452241041594654No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT11730.5406152782578638No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG11530.5313976264546607No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC11390.5249452701924184No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT11150.5138840880285748No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT10760.49590966701232864No Hit
CATAGAGCAGAATTTTGGGGAGAGGGACACTGCTCACGATGGTATTACAT10010.46134347275031684No Hit
CATAGATGGCCCACTGACATTTTCCTTGGTAGGTGGCTTCTGGTGCATCT9910.4567346468487153No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG9250.4263163958981449No Hit
CATAGATGGCCCACTGACATTTTCCTAGATCTGCTCACGATGGTATTACA9070.4180205092752621No Hit
CATAGAGGGATGGTATCAGAGAAGGCTAACTTCGCCTGCCTTTCTCTATG8620.3972807927180551No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG8600.3963590275377348No Hit
CATAGAGTTCCAGCAAAATGAAGGGGACACTTGAAAGCTCCCTGGATCTA7670.3534969466528402No Hit
CATAGAACTAGTTCCAGCACCACCAGTACGGTTGCAGGATGAATGGGGAC7630.3516534162921996No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG7540.3475054729807582No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC7490.3452010600299574No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT7260.3346007604562738No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTGATTTAGGAAGCAGGGTTC7050.32492222606291044No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG6740.31063486576794563No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC6660.30694780504666436No Hit
CATAGAAGGGGTGATGCTCTGATGGATGCTGAAGGATAGTTGGGTGCTCT6610.30464339209586355No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT6590.3037216269155432No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT6420.2958866228828206No Hit
CATAGACAGGGGCCAGAACTCCTAAGAGACAGGGGTGTGGTGTTCTGTCT6260.2885125014402581No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATGTTTGCTATTACGAGGATGCTC6240.28759073625993775No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTGGCACAATGAGGCAATCT6120.2820601451780159No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTAGATCTGCTCACGATGGTAT6080.28021661481737525No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA5960.27468602373545337No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA5850.2696163152436917No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCCTCTTCACCTCCCAGATCTATG5830.26869455006337134No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG5790.26685101970273073No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT5560.2562507201290471No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC5380.24795483350616432No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT5350.24657218573568385No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC5140.23689365134232054No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC5060.23320659062103932No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTTACGGTAGCATTCTTTCTCC4930.22721511694895727No Hit
CATAGAACCAACCAATAATAATGTGCTTGTATAGAATAGCCATGCTGAAG4870.2244498214079963No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA4630.21338863924415258No Hit
CATAGACACTTGACCATGCCCTTGTTCGAACTTTCCCACCGCCCTTTTCT4590.21154510888351194No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG4550.2097015785228713No Hit
CATAGAACTGACCATACACTTGCCCTTCTAGTCTAGGATGAGATAATTGC4430.20417098744094941No Hit
CATAGAACTGACCATACACTTGCCCTCAGGAGTGGGTAGAATCTTGAACT4430.20417098744094941No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGGGGTCTCTACAGTTAGGCTACTT4370.20140569189998847No Hit
CATAGAACTAGTTCCAGCACCACCAGGGTAGCAGCTCCTCTTCTCTTCCC4330.19956216153934783No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGAAAATGTTTGCTATTACGAGG4300.1981795137688674No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA4230.19495333563774628No Hit
CATAGAGCAGACAATGGATGATCAAGTGATGCTATCTTCTGCTGCACTGC4200.19357068786726583No Hit
CATAGAACTAGTTCCAGCACCACCAGACACTTGAAAGCTCCCTGGATCTA4170.19218804009678536No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC4160.1917271575066252No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG4130.19034450973614472No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTCTCATAGACACTTGAAAGCT4010.18481391865422284No Hit
CATAGAACTAGTTCCAGCACCACCAGGAGTTGACAAACGACAGCTTCTAT3930.1811268579329416No Hit
CATAGACACTTGACCATGCCCTTGTTCAGACACTTGAAAGCTCCCTGGAT3840.17697891462150017No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA3800.17513538426085956No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTCTAGGATGAGATAATTGCCC3790.1746745016706994No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3720.17144832353957828No Hit
CATAGAACTGACCATACACTTGCCCTACACATGTACACGGCAGGACTGTC3660.16868302799861737No Hit
CATAGACACTTGACCATGCCCTTGTTCTGGTCTCATAGACACTTGAAAGC3560.1640742020970158No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGACACTTGAAAGCTCCCTGGA3530.16269155432653531No Hit
CATAGAACTGTCCCCTACTTTTCACCAGAACTTTCCCACCGCCCTTTTCT3480.1603871413757345No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTTTATGACAGACCAAGGTCAAGG3470.15992625878557437No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG3330.15347390252333218No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT3320.153013019933172No Hit
CATAGACCAGGACAATCACAGGGCACACTTAACACCCCACCTAAACTCCT3140.1447171333102892No Hit
CATAGAGGGATGGTATCAGAGAAGGCTTACGGTAGGTGGCTTCTGGTGCA3130.14425625072012904No Hit
CATAGAACATCTCCCTGTTCCTCCCATTCTGTCCTCTTCACCTCCCAGAT3060.14103007258900796No Hit
CATAGAACTCTTACCCTTTTGCCAGGAGTTGACAAACGACAGCTTCTATG3030.1396474248185275No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAACTTTCCCACCGCCCTTTT3000.13826477704804702No Hit
CATAGAAACTCTGAGACAGCTAACATTTAAATGTTTGCTATTACGAGGAT2970.13688212927756654No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAGGTGGCTTCTGGTGCATCTA2910.1341168337366056No Hit
CATAGAACTGACCATACACTTGCCCTACGGTTGCAGGATGAATGGGGACA2880.13273418596612513No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTTGCAGGATGAATG2850.13135153819564466No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA2830.13042977301532435No Hit
CATAGAACTGTCCCCTACTTTTCACCATAGAACTTTCCCACCGCCCTTTT2800.12904712524484388No Hit
CATAGAGCAGAATTTTGGGGAGAGGGATGGTATCAGTTAGGCTACTTGGG2790.1285862426546837No Hit
CATAGACTGGCTATTGTTTGGTTTGTACAGGGGTGTGGTGTTCTGTCTAT2780.12812536006452355No Hit
CATAGAACATCTCCCTGTTCCTCCCACGCTAACTTCGCCTGCCTTTCTCT2680.123516534162922No Hit
CATAGAAAAGGGAGGGATTACGGGTGTACGGTTGCAGGATGAATGGGGAC2680.123516534162922No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2670.12305565157276184No Hit
CATAGAACTGACCATACACTTGCCCTGGATCTCAGAGTTAGCTTGCCTCT2520.1161424127203595No Hit
CATAGAACTCTTACCCTTTTGCCAGGCATTCTTTCTCCAGACCTTCATCT2520.1161424127203595No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTACTGGGGTATGTGGCACTCCAG2520.1161424127203595No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT2470.1138379997695587No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCAGCTCCTCTTCTCTTCCCTCT2410.11107270422859776No Hit
CATAGAGTTCCAGCAAAATGAAGGGGGACCAGGGCTGCATGGTGACTTTT2390.11015093904827744No Hit
CATAGAACATCTCCCTGTTCCTCCCACACTGAACGAAATTTAGGTGAGCA2380.10969005645811729No Hit
CATAGACAGGGGCCAGAACTCCTAAGCTTGGTCTCATAGACAGGGGTGTG2350.10830740868763682No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC2250.10369858278603526No Hit
CATAGATCTACTCCTACAATCTTGGCAAAAACATGTACACGGCAGGACTG2240.1032377001958751No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT2190.1009332872450743No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)