FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806343

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806343
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99505
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG67146.747399628159389No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC57255.753479724636953No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG57155.743429978393046No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC54765.50324104316366No Hit
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA43084.329430681875283No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG40964.116376061504447No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA40274.047032812421486No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG30793.0943168684990705No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA24682.480277372996332No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT23652.376764986684086No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT21672.177780011054721No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA21512.1617004170644694No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC20432.05316315763027No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT17501.7587055926837847No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA17211.7295613285764535No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG13961.4029445756494647No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA11691.1748153359127682No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT11641.1697904627908147No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA11051.1104969599517611No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG8570.8612632531028591No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA7950.7989548263906336No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT7910.7949349278930706No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC7760.7798603085272097No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT7550.7587558414150043No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG6410.6441887342344607No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG5880.5909250791417517No Hit
CATAGATCACGTAGAAACTGGAGAGGCTACGCTATACCACACTACACACT5810.5838902567710166No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC5290.5316315763026984No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT5200.5225868046831817No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA4970.4994723883221948No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT4860.48841766745389675No Hit
CATAGACCCAAGACCCCAGCCTTTACCACACTGACGCTATACCACACTAC4510.4532435556002211No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG4390.4411838601075323No Hit
CATAGACACAACAGAGAGAACGGGCTGGTGCATTACAGAGAGGAGATCTA4190.4210843676197176No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGCTATACCACACTACAC4000.4019898497562936No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGCTATACCACACTACA3760.377870458770916No Hit
CATAGAAAAAACAGTTGGCCAGGCATACACTGACGATCATTGTTCACTGC3670.3688256871513994No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA3650.36681573790261796No Hit
CATAGACACAACAGAGAGAACGGGCTACGCTATACCACACTACACACTCT3420.3437013215416311No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA3220.3236018290538164No Hit
CATAGACGGATTATTCTCTCCATGGTCTATGATGCTGAAGTGATGGGCTA3120.31355208280990904No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT3120.31355208280990904No Hit
CATAGACATTTAATCCTCACAATGACCCATACACTGCCCTCTCTGCTGTT3100.3115421335611276No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC3020.3035023365660017No Hit
CATAGACCAGCAGACACTCCCATCATTGCTTCTTGTGGTAACTGGTCTAT2950.29646751419526657No Hit
CATAGACCAACATTTCTTCTCCCAGGGTATGATGCTGAAGTGATGGGCTA2920.29345259032209436No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTGTTTCCCCACTCAAATACCA2810.28239786945379625No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT2800.28139289482940555No Hit
CATAGAAAGGTGCAATCAAGCCAGTTGGTTCTACAAAGGATTCTGGGCCA2750.2763680217074519No Hit
CATAGAAGGACAAAGACATTTAGGACCCAGGGTGGAAGGGTAAGAGAGGG2740.27536304708306114No Hit
CATAGAAATGATGCTGAAGGGCCTGCAAATGATGCTGAAGTGATGGGCTA2710.27234812320988894No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA2650.26631827546354453No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG2600.2612934023415909No Hit
CATAGATGGCCAAGATACGAGCACATTGCTTCTTGTGGTAACTGGTCTAT2560.2572735038440279No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA2550.2562685292196372No Hit
CATAGAGTCCAACTATTCCAGCACCAAGTCCCTGGCTCAGGTATGTCTTT2520.253253605346465No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTTCTTCCTTTTCTGCCTTCATC2500.2512436560976835No Hit
CATAGAAAAAACAGTTGGCCAGGCATTGCTGAAGTGATGGGCTAGATCTA2460.24722375760012058No Hit
CATAGAAAGGTGCAATCAAGCCAGTTACACTGACGATCATTGTTCACTGC2400.24119390985377617No Hit
CATAGACCAGCAGACACTCCCATCATGATCTAGCCCATTGCTTCTTGTGG2260.22712426511230593No Hit
CATAGAAATGATGCTGAAGGGCCTGCCATAGAAATGATGCTGAAGTGATG2220.22310436661474295No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGACATGCCAGGAATCAATGT2210.22209939199035222No Hit
CATAGACGGATTATTCTCTCCATGGTCTGTTTCCCCACTCAAATACCATC2130.2140595949952264No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGTTCTACACATAGAGATCCCAC2090.2100396964976634No Hit
CATAGAAAAAACAGTTGGCCAGGCATGTGGCTCAGGTATGTCTTTATTAG2050.2060197980001005No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGGCTCAGGTATGTCTT1990.1999899502537561No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGTCATTGTCGCTGTCC1930.1939601025074117No Hit
CATAGAGTCCAACTATTCCAGCACCAGAGTGTCTGTTTCCCCACTCAAAT1920.19295512788302097No Hit
CATAGACGGATTATTCTCTCCATGGTCTGCTGAAGTGATGGGCTAGATCT1910.1919501532586302No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGTTCTACA1900.1909451786342395No Hit
CATAGACGTGACTAAAAGCATGTTGGTCTACCAGTTATTAGTTGAATGAG1810.18190040701472288No Hit
CATAGATCAAGGAAAACACCAGCCCAAGGGGTAAGGCGTACTGGTCTATG1810.18190040701472288No Hit
CATAGAGAAGACTCCCTCAACCCACCCTGCAGTCTTTGGAGGAATCTATG1800.18089543239033215No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA1770.17788050851715995No Hit
CATAGAACAGATGTTCTCCTTGTTTTCTATAACAAGGGGTAAGGCGTACT1730.173860610019597No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT1700.17084568614642479No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCATTGCTTCTTGTGGTAAC1680.16883573689764333No Hit
CATAGACATTTAATCCTCACAATGACCCATTGCTTCTTGTGGTAACTGGT1670.1678307622732526No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC1580.158785990653736No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG1560.15677604140495452No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGACGCTATACCACACT1550.1557710667805638No Hit
CATAGAAGGACAAAGACATTTAGGACCCAGGCATCTATGTGAGGCTAATC1520.1527561429073916No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC1520.1527561429073916No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG1460.14672629516104718No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGCCACGCTGTCCTTCTCT1440.14471634591226573No Hit
CATAGAGCTTGGGTGCGAACATCAACTACGGTAGCAGCATAATTTCCCAT1420.14270639666348423No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT1350.13567157429274912No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTACAAATGAGAAACCTGGA1330.13366162504396764No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA1230.12361187880006029No Hit
CATAGAAGGACAAAGACATTTAGGACCCCATGGGTCTACCAGTTATTAGT1230.12361187880006029No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTCCCAACTGTCTCTGAAAAA1220.12260690417566958No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGACGATCATTGTTCACTGC1200.12059695492688809No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTTCTACAAAGGATTCTGGGC1180.11858700567810662No Hit
CATAGAGTGCCTGTTTCCTCATTCGTAGAGTGTCTGTTTCCCCACTCAAA1150.11557208180493442No Hit
CATAGAGAAGACTCCCTCAACCCACCCTTGGTCTCAGAGATCCCACCATT1130.11356213255615297No Hit
CATAGACCTCCGACAGTTTTTGTGCACCTTCATTGTTGCTCTATGAGACC1090.10954223405859001No Hit
CATAGAAATGATGCTGAAGGGCCTGCTAGAAATGATGCTGAAGTGATGGG1090.10954223405859001No Hit
CATAGAAATGATGCTGAAGGGCCTGCGACATGGTTCTACACATAGAAATG1060.1065273101854178No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCTGATGCTGAAGTGATGG1050.1055223355610271No Hit
CATAGACGGATTATTCTCTCCATGGTCTGAGGAGAATTCAAGCTGCTCTA1010.10150243706346415No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)