FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806344

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806344
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99505
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG65756.607708155369077No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG56025.629867845836892No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG55615.588663886236873No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC55325.5595196221295415No Hit
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT42404.2610924074167125No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG40214.041002964675141No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC39093.9284458067433796No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG29903.004874126928295No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA24102.4219888447816693No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT23122.3235013315913773No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT21252.1355710768303102No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT21152.1255213305864027No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC20222.032058690518064No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA17301.73860610019597No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG16381.6461484347520225No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT13611.3677704637957893No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA13021.3084769609567357No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT11241.129591477815185No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT11201.1255715793176222No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA10631.0682880257273504No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG8420.8461886337369982No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT7750.7788553339028189No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT7700.7738304607808653No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC7690.7728254861564745No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT7360.7396613235515803No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG6360.6391638611125069No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC5740.5768554344002813No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTAGCCTCTCCAGTTTCTACGTGAT5360.5386663986734335No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG5230.525601728556354No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT5120.5145470076880558No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT4800.48238781970755235No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGTGCTCGTATCTTGG4760.4783679212099895No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG4270.4291241646148435No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGTAAAGGCTGGGGTCT4140.41605949449776397No Hit
CATAGATCTCCTCTCTGTAATGCACCAGCCCGTTCTCTCTGTTGTGTCTA4080.41002964675141956No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGGCTGGTGTTTTCCTT3730.3748555348977438No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGCCTGGCCAACTGT3680.36983066177579016No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGTGGGTTGAGGGAGTC3540.3557610170343199No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA3280.3296316768001608No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTAGCCCGTTCTCTCTGTTGTGTCT3210.32259685442942565No Hit
CATAGATCTAGCCCATCACTTCAGCATCATAGACCATGGAGAGAATAATC3140.3155620320586905No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTATGGGTCATTGTGAGGATTAA3000.3014923873172203No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC2970.2984774634440481No Hit
CATAGACCAGTTACCACAAGAAGCAATGATGGGAGTGTCTGCTGGTCTAT2860.28742274257574996No Hit
CATAGATCTAGCCCATCACTTCAGCATCATACCCTGGGAGAAGAAATGTT2860.28742274257574996No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG2830.28440781870257775No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCAACTGGCTTGATTGCACCTT2780.27938294558062404No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCCTGGGAGAAGAAATGTTGG2760.27737299633184265No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTGCAGGCCCTTCAGCATCA2720.2733530978342797No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGTCCTAAATGTCTTTGTCCT2690.2703381739611075No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGCTGGAATAGTTGGACTCTATGT2540.25526355459524647No Hit
CATAGACCAGTTACCACAAGAAGCAATGTGCTCGTATCTTGGCCATCTAT2520.253253605346465No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGGGACTTGGTGCTGGAATAG2510.25224863072207426No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG2510.25224863072207426No Hit
CATAGATGAAGGCAGAAAAGGAAGAACACCAACATGCTTTTAGTCACGTC2470.24822873222451136No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG2420.24320385910255765No Hit
CATAGATCTAGCCCATCACTTCAGCAATGCCTGGCCAACTGTTTTTTCTA2400.24119390985377617No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTAACTGGCTTGATTGCA2320.23315411285865034No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT2310.23214913823425956No Hit
CATAGACCAGTTACCACAAGAAGCAATGGGCTAGATCATGATGGGAGTGT2180.21908446811718002No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGGCAGGCCCTTCAG2140.21506456961961712No Hit
CATAGAACATTGATTCCTGGCATGTCCCATTGTAGATTTCTTTCACCTCC2130.2140595949952264No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACACCCTGGGAGAAG2090.2100396964976634No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCATGGAGAGAATAATCCGTC2060.2070247726244912No Hit
CATAGAGCTAATAAAGACATACCTGAGCCACATGCCTGGCCAACTGTTTT2000.2009949248781468No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTACAGTTGTGGAAAGTG1960.1969750263805839No Hit
CATAGATCTAGCCCATCACTTCAGCAGACCATGGAGAGAATAATCCGTCT1900.1909451786342395No Hit
CATAGATGGGACAGCGACAATGACAGTGTATGAGCATGCCTTTGATAAAA1890.18994020400984876No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTGGTGCTGGAATAGTT1860.18692528013667656No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCAACATGCTTTTAGTCAC1780.17888548314155067No Hit
CATAGATTCCTCCAAAGACTGCAGGGTGGGTTGAGGGAGTCTTCTCTATG1780.17888548314155067No Hit
CATAGACCAGTACGCCTTACCCCTTGGGCTGGTGTTTTCCTTGATCTATG1750.17587055926837847No Hit
CATAGACCAGTACGCCTTACCCCTTGTTATAGAAAACAAGGAGAACATCT1730.173860610019597No Hit
CATAGACCAGTTACCACAAGAAGCAATGGGTCATTGTGAGGATTAAATGT1730.173860610019597No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC1710.17185066077081554No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG1650.16582081302447113No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGACAGTTGTGGAAAGTGCAAT1620.16280588915129893No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCACATAGATGCCTGGGTCCTA1580.158785990653736No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACAGTTGTGGAAAGTG1550.1557710667805638No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC1530.15376111753178232No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG1530.15376111753178232No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCGTCAGTGTATGATGGGAGTGTC1520.1527561429073916No Hit
CATAGATGACATGGGAAATTATGCTGCTACCGTAGTTGATGTTCGCACCC1450.14572132053665643No Hit
CATAGATTCAGAGAAGGACAGCGTGGCCTCCCATGATTTACCATCACAAA1450.14572132053665643No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG1420.14270639666348423No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA1340.13466659966835837No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTACACTGTCATTGTGGGTTTTAA1310.13165167579518616No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCATGGGGTCCTAAATGT1240.12461685342445103No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT1210.12160192955127883No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTACGAATGAGGAAACA1170.11758203105371588No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACACAGTTGTGGAAAGTGCAATG1160.11657705642932517No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGACAGTTGTGGAAAGTGCAA1140.11456710718054368No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACACAGTTGTGGAAAGTGCAATG1140.11456710718054368No Hit
CATAGATGGCAAATGGTGGGATCTCTGAGACCAAGGGTGGGTTGAGGGAG1130.11356213255615297No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTAGCAGGCCCTTCAGCA1100.11054720868298076No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG1100.11054720868298076No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACCATGGAGAGAATAATCCGTCTA1040.10451736093663636No Hit
CATAGATCTAGCCCATCACTTCAGCATCAGACTGTTAATATAGAAGAGAC1040.10451736093663636No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)