FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806346

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806346
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences245499
Sequences flagged as poor quality0
Sequence length150
%GC33

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT2708711.033446164750162No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG142035.785359614499448No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG133635.443199361300861No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG127655.1996138477142475No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC93103.7922761396176763No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG82563.362946488580402No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA73813.006529558165206No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG63592.5902345834402585No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT59252.4134517859543214No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC53222.167829604193907No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC52592.142167585204013No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA49882.0317801701839926No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT49252.006118151194099No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG41781.701839926028212No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT40911.6664018998040726No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC39631.614263194554764No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA39471.6077458563986002No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG34371.4000057026708865No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT27021.1006154811221227No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT26321.072102126688907No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT26041.0606967849156208No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT23120.9417553635656358No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC22680.9238326836361858No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT21720.8847286546992045No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG21400.8716939783868773No Hit
CATAGATGAAGGCAGAAAAGGAAGAACATGCCTGGCCAACTGTTTTTTCT19100.7780072423920261No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG18390.7490865543240502No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA17080.6957258481704609No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT16670.6790251691452918No Hit
CATAGAGCAAGCCCTCTAAGCCTATCAATCCTGTGTTCATGGCTTCTATG15940.6492898138077956No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT14660.597151108558487No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGCTGGAATAGTTGGACTCTATGT13680.5572324123519852No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG13520.5507150741958216No Hit
CATAGATCTAGCCCATCACTTCAGCAGTCTGAATGATGGGAGTGTCTGCT12440.5067230416417174No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT11290.45987967364429183No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG10480.4268856492287138No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT9850.4012236302388197No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG8840.3600829331280372No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACCAACATGCTTTTAGTCACGTC8680.3535655949718736No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG8120.3307549114253011No Hit
CATAGACCAGTACGCCTTACCCCTTGGGCTGGTGTTTTCCTTGATCTATG8060.3283109096167398No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA7710.31405423240013197No Hit
CATAGACCAGTACGCCTTACCCCTTGGCAAATGATGGGAGTGTCTGCTGG7130.29042888158403907No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCAACATGCTTTTAGT6610.26924753257650746No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTGGGTCCTA6540.2663961971331859No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG5980.24358551358661337No Hit
CATAGAACATTGATTCCTGGCATGTCCGTCAGTGTAGACCATGGAGAGAA5850.23829017633473049No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGACACTGACGAATGAGGAAAC5640.22973617000476582No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT5580.22729216819620449No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT5430.22118216367480112No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGGGTTGAGGGAGTCTTCTCTATG5380.21914549550100001No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACCAACATGCTTTTAG5360.21833082823147953No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG5340.2175161609619591No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTACACTGTCATTGTGGGTTTTAAC5170.21059148917103532No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG5080.20692548645819328No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGACATGCCTGGCCAACTGTT4980.20285215011059107No Hit
CATAGAGCAAGCCCTCTAAGCCTATCACTCTCCCACCATTCAGACTCTAT4940.20122281557155017No Hit
CATAGAACACGAAGATTTCAGATTAGCCTGGGCTGGTGTTTTCCTTGATC4870.19837148012822864No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA4730.1926688092415855No Hit
CATAGAACACGAAGATTTCAGATTAGCCTACACTGTCATTGTGGGTTTTA4710.19185414197206505No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT4490.18289280200734015No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTACGAATGAGGAAACA4450.18126346746829927No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT4410.17963413292925837No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAAGAACCCTGGGAGAAGAAA4290.17474612931213568No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG4270.17393146204261523No Hit
CATAGACCCTCTCTTACCCTTCCACCATTCACTCTCCCACCATTCAGACT4170.16985812569501302No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG4100.16700679025169146No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGGGTCATTGTGAGGA4090.16659945661693124No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG4090.16659945661693124No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCAGGC4080.166192122982171No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGACAGTTGTGGAAAGTGCAATG3920.15967478482600744No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT3880.15804545028696654No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTATGGTGGGTTGAGGGAGTCTTC3700.15071344486128252No Hit
CATAGATGGCAAATGGTGGGATCTCTATGGTGCTGGAATAGTTGGACTCT3580.14582544124415986No Hit
CATAGATCTAGCCCATCACTTCAGCATCAGCAGGCCCTTCAGCATCATTT3540.14419610670511895No Hit
CATAGAATCTGGTTCAAGCACACAGTAGATGCCTGGCCAACTGTTTTTTC3510.1429741058008383No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTATGATGGG3460.14093743762703717No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTTGTGGAAAGTGCAATGAGTCTAT3330.13564210037515428No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC3280.13360543220135315No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGCAGGCCCTTCAGC3250.1323834312970725No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCATTGTGGGTTTTAACT3180.12953209585375094No Hit
CATAGATGGGACAGCGACAATGACAGACACTGTCATTGTGGGTTTTAACT3110.12668076041042936No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG2940.11975608861950558No Hit
CATAGACCAGTACGCCTTACCCCTTGGTCTCATAGAGCAGGCCCTTCAGC2910.1185340877152249No Hit
CATAGATGACATGGGAAATTATGCTGCTACGGTAGCAGGCCCTTCAGCAT2880.11731208681094424No Hit
CATAGATGACATGGGAAATTATGCTGCTACCGTACCTTCCTTTCAATAGC2840.11568275227190335No Hit
CATAGATCTCCTCTCTGTAATGCACCAGCCCGTTCTCTCTGTTGTGTCTA2750.11201674955906135No Hit
CATAGATTCCTCCAAAGACTGCAGGCCCTTCAGCATCATTTCTATGTGTA2720.11079474865478067No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG2700.10998008138526022No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC2660.10835074684621933No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACCATGGAGAGAATAATCCGTCTA2490.10142607505529554No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA2480.10101874142053532No Hit
CATAGATGGGACAGCGACAATGACAGTGCATAAAAACTGTCGGAGGTCTA2460.10020407415101487No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)