FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806359

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806359
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences164812
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2750416.6881052350557No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA130867.939955828459093No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC100286.084508409581827No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC64393.906875712933524No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG63003.8225371938936483No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG62293.7794578064704027No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA62273.7782443025993255No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA59853.631410334198966No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA55483.3662597383685657No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC53633.2540106302939105No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG41942.5447176176492006No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT34172.0732713637356506No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA22321.3542703201223212No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT19971.2116836152707327No Hit
CATAGAACAATGTAATAAGCATCGGAGGACCATGCTCACACCTTGATCTA17831.0818387010654564No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGCTCATACAGAATTAGATC17691.073344173967915No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT16280.9877921510569619No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT16130.9786908720238817No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT15750.9556342984734121No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT13090.7942382836201247No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG12570.7626871829721137No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTCAGACATGTTTCCTAG12330.7481251365191854No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG11960.7256753149042545No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG11520.6989782297405529No Hit
CATAGAGCTATCAGTATACTCCCACCATGATCTGAGCAAGGATAGCCCTC10620.6443705555420721No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC10580.6419435477999175No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT10090.6122127029585225No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC9880.5994709123122103No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG9460.573987331019586No Hit
CATAGACCACACCCAAACACCACGTATTCGCTCTGCGCCTCCAGAGCAGC8610.5224134164987986No Hit
CATAGAGAAGAGAAGGCGACAATGGCCAGAGACTCTTCACTATGTCATCT6590.3998495255199864No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC6490.39378200616459963No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT6280.3810402155182875No Hit
CATAGAGAAGAGAAGGCGACAATGGCAGAAAGAAGCCCCAAGGGCAGGTC6100.3701186806785914No Hit
CATAGATTCTCCCTTGTGCTTTTGGTGACATGGTGGGTGCCTGATTGTTC5790.3513093706768925No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTTCTACACA5290.32097177389995873No Hit
CATAGACAGGAGGAGGAAGAAGAGGACCATGCTCACACCTTGATCTATGA5190.314904254544572No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTGACTCTTCACTATGTCAT5130.31126374293133996No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT4590.2784991384122515No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC4340.2633303400237847No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA4120.24998179744193383No Hit
CATAGAGAATTTGCACACCACGGGACTTCAGTTGACTATAAGAAACACCT3950.23966701453777636No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTATGGAAGGATCAAGCAAATAAGC3950.23966701453777636No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC3910.23724000679562168No Hit
CATAGAGAATTTGTACACCACGGGACATGGATGAAGCTGGATCTATGAGA3890.2360265029245443No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC3620.21964420066500012No Hit
CATAGACTTGATGCCCAGGAAACCTCCAATAGATGGGACTTCAGTTGACT3570.21661044098730675No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGGACATGGATGAAGCTGGATCTA3500.21236317743853605No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGGGACATGGATGAAGC3400.2062956580831493No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTCTCATAGAAAGGGACATGGAT3070.18627284421037302No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT3050.1850593403392957No Hit
CATAGACCCTTAGAGTTTCAGCCTCAGACATGTTTCCTAGTTTCAGTTCT2930.1777783171128316No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG2800.16989054195082884No Hit
CATAGATGTCTCCTAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC2640.16018251098221004No Hit
CATAGAGAAGAGAAGGCGACAATGGGACATGGATGAAGCTGGATCTATGA2550.15472174356236196No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT2520.15290148775574594No Hit
CATAGACCCTTAGAGTTTCAGCCTCCCTTGTGCTCATACAGAATTAGATC2430.1474407203358979No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGAGACCAAGTCCGTCCGCA2220.13469892968958572No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT2170.13166517001189235No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG2130.12923816226973764No Hit
CATAGATGTCTCCCAGGCTAGAGTGCTCATACAGAATTAGATCTAGCTCT2130.12923816226973764No Hit
CATAGAGAAGAGAAGGCGACAATGGCAGAGAGGTCTTGGCAGGCTTGTCT2070.1255976506565056No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT2020.12256389097881222No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGACGACATGGTGGGTGCCT1980.12013688323665751No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1940.11770987549450283No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATCCTGCCCCGGCCGCTAAGC1900.11528286775234814No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1820.11042885226803874No Hit
CATAGAGGGTGTTCTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA1820.11042885226803874No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTACACTGACGACATGGTGG1800.1092153483969614No Hit
CATAGAGCTTCTTCCTGTTCATATTGGGCAACAGAACAACAACATCTATG1800.1092153483969614No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)