FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806360

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806360
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences164812
Sequences flagged as poor quality0
Sequence length150
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2725516.53702400310657No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT133248.084362789117296No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG110306.692473848991579No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG65733.988180472295707No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT64663.9232580151930687No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA64543.915976991966604No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG64113.8898866587384417No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA59803.6283765745212726No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT56343.4184404048248913No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG53603.2521903744872946No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG42602.5847632453947527No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT34402.08722665825304No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT22661.374899885930636No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT20121.2207848943038129No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCCGATGCTTATTACATTGTTCTA17781.0788049413877632No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC17771.0781981894522243No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT16621.008421716865277No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT16320.9902191587991166No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT16110.9774773681528045No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG12590.763900686843191No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTAGAGGCAAGGGTACTA12380.7511588961968789No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG12240.7426643690993374No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG11770.7141470281290198No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC11280.6844161832876247No Hit
CATAGAGGGCTATCCTTGCTCAGATCATGGTGGGAGTATACTGATAGCTC10570.6413367958643789No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT10510.6376962842511468No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC10370.6292017571536054No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA10310.6255612455403733No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA9720.5897628813435916No Hit
CATAGATTTCTGTACCTCACTGCCGATTTCTGTATGCGGAGGTGGCGCAG8310.5042108584326385No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCTCTGGCCATTGTCGCCTTC6690.4059170448753731No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG6690.4059170448753731No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT6400.3883212387447516No Hit
CATAGAACAATCAGGCACCCACCATGTCACCAAAAGCACAAGGGAGAATC5910.35859039390335656No Hit
CATAGACGGGAAGAGTAAGACCACCCAATTACCTTTCACGTAAGCAGATG5530.3355338203528869No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCACACTGAAACATTTTCTGG5200.31551100648011066No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCTTCTTCCTCCTCCTGTCTATGT5170.31369075067349467No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA5000.3033759677693372No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC4670.28335315389656096No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC4280.2596898284105526No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA4170.2530155571196272No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCGTGGTGTGCAAATTCT4120.24998179744193383No Hit
CATAGACACAACGTTTGAGACTGCCTCCTCAAGTGGGTCCCTGACCTCCA3830.2323859913113123No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG3800.23056573550469628No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCATCTATTGGAGGTTTC3610.21903744872946146No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCTCTTCTTCCTCCTCCTGTCTA3540.21479018518069073No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAGAGGCAAGGGTACTATTT3460.20993616969638132No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG3170.19234036356575976No Hit
CATAGATCCAGCTTCATCCATGTCCCTTTCTATGAGAGAGGCAAGGGTAC3100.18809310001698906No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGGCTGAAACTCTAAGGGTCT2920.1771715651772929No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTCTATG2870.17413780549959954No Hit
CATAGATCCAGCTTCATCCATGTCCCATTGTCGCCTTCTCTTCTCTATGT2530.15350823969128463No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGGCTGAAACTCTA2430.1474407203358979No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTCTAGCCTGGGAGACATCT2320.14076644904497246No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC2260.1371259374317404No Hit
CATAGAGGAAAGAACAACTGCGGACGGACTTGGTCTCATAGAGGCAAGGG2170.13166517001189235No Hit
CATAGATCCCTGGCAAGAATTCCCCAATATGAACAGAAAGAAGCTCTATG2140.1298449142052763No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG2090.12681115452758293No Hit
CATAGACAAGCCTGCCAAGACCTCTCTGCCATTGTCGCCTTCTCTTCTCT2020.12256389097881222No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCGGGGCAGGATAGAGGCAAGGGTA1950.11831662743004151No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCACAGGAAAGTTGGAACCTA1940.11770987549450283No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACACTGAAACATTT1880.11406936388127077No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1790.10860859646142271No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)