FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806362

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806362
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28168
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG470916.717551831865947No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG19496.919199091167282No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA16785.95711445612042No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT15205.396194262993468No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT11934.235302470888952No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTGCCACCCCATCCTACAT8142.889804032945186No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAGGGATAGTTTGAGGGT8142.889804032945186No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT7902.804600965634763No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGGCTTGTGAGGGCTGAAGT7262.577392786140301No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT5391.9135188866799206No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA4891.7360124964498722No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCCGGCCACATTATTTTCTATG4871.72891224084067No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA4571.6224084067026412No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGCATTTTAACACAGCATTGAA4421.5691564896336267No Hit
CATAGAGGGACGGAGGCAAGAGGATATAGAAGAGTAAGGCTTGTGAGGGC4161.4768531667140017No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG4001.4200511218403862No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT3581.2709457540471456No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTGAGGCACT3441.2212439647827322No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGGGTTGGGAG3231.146691280886112No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG3021.0721385969894917No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAGGGATAG2981.0579380857710878No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA2500.8875319511502414No Hit
CATAGATTGCACATAAAGTCTGATCCCATACGGTAGAGGCACTTGGTCCA2280.8094291394490201No Hit
CATAGACCGGGGGTAGATAGGTGGTTGGGAGTTCGAGACCAGTCTATGTG2180.7739278614030105No Hit
CATAGACCATCCTCCCACCTTGACCTATCCCATCTCAAGTCTCACTCTTC2050.727776199943198No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG2000.7100255609201931No Hit
CATAGACATGAGTGGCCGAACAGACCAGTCTATGTGTAGAACCATGTCGT1760.6248224936097699No Hit
CATAGATTGCACATAAAGTCTGATCCCAGTAGCAGAGGCACTTGGTCCAG1560.5538199375177506No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG1490.5289690428855439No Hit
CATAGAGTTTTGTTCCCTTGCTGGCTTCCCTGCTTGTCTTTCATCTATGT1230.4366657199659188No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTACAGGAGCACCCAGTACAGGAGCA1180.4189150809429139No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACCAACTCCTATGTAA1170.415364953138313No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGAGACCAAGATGGGTTT1000.35501278046009654No Hit
CATAGACCGGGGGTAGATAGGTGGTTAGTGTAGGGATAGTTTGAGGGTAA990.35146265265549564No Hit
CATAGACTCAAGAAACTTACAATCATGGCATTGCTCTTTGACTTATGATG970.3443623970462937No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC960.3408122692416927No Hit
CATAGACCGGGGGTAGATAGGTGGTTAGTGTTAAAGTGGGGAAAGGACAC870.308861119000284No Hit
CATAGACTACCACTACCCAGCACAGGAGCCACCCCATCCTACATGTGTCT800.2840102243680772No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT790.28046009656347626No Hit
CATAGAAGCAGCATTGATCATCCTCCATGTGTAGAACCATGTCGTCAGTG780.2769099687588753No Hit
CATAGACTACCACTACCCAGCACACCCAGTACAGGAGCACCCTCTATGTG770.27335984095427435No Hit
CATAGAAGGTGATAATCATGACAGCCATGCTGAAGTCCCATGATCTATGT680.24140869071286566No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATACGGTAGCAGAGGCACTTG630.22365805168986083No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT600.21300766827605794No Hit
CATAGACTACCACTACCCAGCACAGCCAGTACAGGAGCACCCTCTATGTG590.20945754047145695No Hit
CATAGAGTTTTGTTCCCTTGCTGGCATTGCTCTTTGACTTATGATGGAGT550.1952570292530531No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCCATCCTACATGTGTCTA530.18815677364385117No Hit
CATAGACCGGGGGTAGATAGGTGGTTAGTGTAGCATTTTAACACAGCATT530.18815677364385117No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGCCACCCCATCCTACATGTG500.17750639023004827No Hit
CATAGAGGTGAGCGGCTGTCTCCATCCCATCTCAAGTCTCACTCTTCTAT450.15975575120704347No Hit
CATAGACTCAAGAAACTTACAATCATGGCATACGGTAGCAGAGTCTTTTG390.13845498437943765No Hit
CATAGACCATCCTCCCACCTTGACCTTTCCCCATCTCCAACCCTCTATGT360.12780460096563476No Hit
CATAGACCGGGGGTAGATAGGTGGTTAGTGTGAGGCACTTGGTCCAGACT360.12780460096563476No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCAGTACAGGAGCACCCTCTATGTG350.1242544731610338No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCCCGGCCACATTATTTTCTATGTG350.1242544731610338No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAGCCAATGAGGCACTTGGTCC320.1136040897472309No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAGTGTGCCACCCC310.11005396194262992No Hit
CATAGATTGCACATAAAGTCTGATCACATCTCAAGTCTCACTCTTCTATG300.10650383413802897No Hit
CATAGAGGGACGGAGGCAAGAGGATATAGAGGTGTCCTTTCCCCATCTCC290.102953706333428No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)