FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806363

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806363
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93929
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA71837.6472654877620325No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC56456.009858510151284No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG52945.636172002257024No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC42334.506595407169245No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG42324.5055307732436205No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG33303.545230972330164No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG29263.115118866377796No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT24082.563638492904215No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC21862.3272897614155372No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC20182.1484312619105923No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC18621.9823483695131427No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA16521.7587752451319616No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA15431.642730147238872No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT15021.5990801562882604No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT14431.5362667546764046No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT14351.527749683271407No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT12701.352085085543336No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG12111.2892716839314802No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA10291.0955083094677895No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA9340.9943680865334455No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA8870.9443302920290858No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT8780.9347485866984637No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA8420.8964217653759755No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG7210.7676010603753899No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGCTATACCACACTACA6770.7207571676479042No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA6670.7101108283916575No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT6090.6483620607054265No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA6000.6387803553748044No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG5470.5823547573166966No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA5310.5653206145067018No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG5300.5642559805810773No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGCCCTCTCTGCT5150.5482864716967071No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGCTTCTTGTGGTAACTGGTC5090.5418986681429591No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGTCATTGTCGCTGTCCC4980.5301876949610876No Hit
CATAGAAAAAACAGTTGGCCAGGCATACGCTATACCACACTACACACTCT4760.5067657485973448No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGATCATTGTTCACT4620.49186087363859937No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC4070.4333060077292423No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC3830.40775479351425015No Hit
CATAGATCATGGGACTTCAGCATGGCCCATAGAGTGTCTGTTTCCCCACT3810.4056255256630008No Hit
CATAGATCATGGGACTTCAGCATGGCGATCATTGTTCACTGCAGCCTCTA3410.3630401686380138No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGCAGAAGTAGGAAGTATT3230.3438767579767697No Hit
CATAGATCATGGGACTTCAGCATGGCAACTGACGACATGGTTCTACAAAG3100.33003651694364894No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG3060.32577798124115026No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA3060.32577798124115026No Hit
AAGGATTCTGGGCCATCTATGAGACCAAGTCTCTGCTACCGTACAGAGCT3060.32577798124115026No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA3010.32045481161302686No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT2690.2863865259930373No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTCATTTATTTTAAAGGACT2680.2853218920674126No Hit
CATAGACCTCCGACAGTTTTTATGCACACTGGAGACAGCCGCTCACCTCT2490.2650938474805438No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA2450.2608353117780451No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGCTATACCACACT2420.25764141000117113No Hit
CATAGATCCACGTGAGAATAAAGCATACAACACTGGAGACAGCCGCTCAC2400.25551214214992174No Hit
CATAGATCATGGGACTTCAGCATGGCCATGGTTCTACACATAGATGTGTA2350.2501889725217984No Hit
CATAGAGTCCAACTATTCCAGCACCAAAAGGCTAATCTGAAATCTTCGTG2310.24593043681929969No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGCTATACCACACTACA2300.244865802893675No Hit
CATAGATCATGGGACTTCAGCATGGCATAGAGATCCCACCATTTGCCATC2270.241671901116801No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT2170.23102556186055423No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGATCATTGTTCACTGC2080.22144385652993218No Hit
CATAGAGTGTCTGTTTCCCCACTCAAATACCATCTATGAGACCAAGTCTC2060.21931458867868286No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGTGTGGAGACAGCCGCTCACC2010.21399141905055946No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGTGGAAGGGTAAGAGAGGGTCTA2000.21292678512493476No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG1990.21186215119931012No Hit
CATAGATCATGGGACTTCAGCATGGCCATAGAGATCCCACCATTTGCCAT1980.21079751727368545No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG1960.2086682494224361No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT1900.20228044586868807No Hit
CATAGACCCAAGACCCCAGCCTTTACACTTGGGCCCCAGTGTGAATACTT1860.19802191016618934No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA1840.19589264231494002No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT1820.19376337446369066No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGACATGCCAGGAATCAATGT1770.18844020483556728No Hit
CATAGATGTTTTATCAAAGGCATGCTCATGGAGACAGCCGCTCACCTCTA1730.18418166913306858No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT1720.18311703520744393No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT1580.16821216024869848No Hit
CATAGACCAGCAGACACTCCCATCATTCACAAATGAGAAACCTGGATGCT1510.16075972276932576No Hit
CATAGATGTGTAGCCTGGGTCTGACAAATGAGAAACCTGGATGCTTCTAT1510.16075972276932576No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG1490.15863045491807642No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA1450.15437191921557772No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGTTCTACACA1360.14479021388495567No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGGAGACAGCCGCTCACCTC1340.1426609460337063No Hit
CATAGAGTCCAACTATTCCAGCACCACCCACAGCCAGGAAAGAATCTATG1300.13840241033120762No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC1280.13627314247995828No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCATGGTTCTACAAAGGAT1260.13414387462870891No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC1120.11923899966996349No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGTCATCAGGAACCATGGGA1110.1181743657443388No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA1090.11604509789308946No Hit
CATAGAGAAGACTCCCTCAACCCACCTGGTTCTACAAAGGATTCTGGGCC1080.11498046396746478No Hit
CATAGAAATGATGCTGAAGGGTCTGTTTCCCCACTCAAATACCATCTATG1070.11391583004184012No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGTTTCCCCACTCAAATACC1050.11178656219059076No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGAATGGTGGAAGGGTAAGAGAG1040.11072192826496609No Hit
CATAGAACAGATGTTCTCCTTGTTTTCTATAACAAGGGGTAAGGCGTACT1040.11072192826496609No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCATTGCTTCTTGTGGTA990.10539875863684273No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG960.1022048568599687No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCGTATGGAGACAGCCGCTCAC960.1022048568599687No Hit
CATAGACGGATTATTCTCTCCATGGTCTACACTGACGATCATTGTTCACT950.10114022293434403No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)