FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806371

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806371
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38728
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1643142.4266680437926No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA14023.6201198099566207No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTTCTA6971.7997314604420573No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC6281.6215657921916962No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT4611.1903532328031399No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT4471.154203676926255No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT3670.947634786201198No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC3380.872753563313365No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG2990.7720512290848999No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT2940.7591406734145838No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT2890.7462301177442677No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG2590.6687667837223714No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG2530.6532741169179922No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA2500.6455277835158025No Hit
CATAGACTTGATGCCCAGGAAACCTCAGACATGTTTCCTAGTTTCAGTTC2150.5551538938235901No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC1840.4751084486676307No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC1650.4260483371204296No Hit
CATAGATTCTCCCTTGTGCTTTTGGTCGGCAGTGAGGTACAGAAATCTAT1500.3873166701094815No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTTCTACTTC1430.36924189217103903No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGAGACTTCAGTTGACTATAAG1410.3640776699029126No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG1380.356331336500723No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTATAGAGAAACTTTTAACG1330.34342078083040695No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC1330.34342078083040695No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC1320.34083866969634374No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC1300.3356744474282173No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA1290.3330923362941541No Hit
CATAGACCCTTAGAGTTTCAGCCTCCAGCAGAATCAGGGTTGGTTCTATG1280.3305102251600909No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTGACGACTCTTCACTAT1250.32276389175790127No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC1140.294360669283206No Hit
CATAGAGGGTGTTTTTCGGTGTCACAGTGAGGTGAAATTGCACTACTTCA1130.2917785581491428No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC1110.2866143358810163No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGACTTGTGCTCATACAGAAT1050.27112166907663704No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT1030.26595744680851063No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGAGACAGCCGCTCACCTCTA1020.26337533567444743No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1000.25821111340632097No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT990.25562900227225777No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGTGAGAAATGATGATGGC970.25046478000413136No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG970.25046478000413136No Hit
CATAGAACAAGGCCAGAATTACCCTGGGCAACAGAACAACAACATCTATG960.24788266887006816No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGATCTGAGCAAGGATA900.2323900020656889No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACTGACGACTCTTCACT880.2272257797975625No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA870.22464366866349927No Hit
CATAGACCCTTAGAGTTTCAGCCTCCGTATGATCTGAGCAAGGATAGCCC840.21689733526130967No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTTCTAC840.21689733526130967No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACATAGAATTAGCGGAGAG820.21173311299318323No Hit
CATAGACCTTCCTGTTGGCCACACAGGAGGATCACTTGAGCACAGGAATT820.21173311299318323No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA820.21173311299318323No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT790.2039867795909936No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG780.2014046684569304No Hit
CATAGACAGCTCACAGACTGCATACTCTTGTGCTCATACAGAATTAGATC770.19882255732286716No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACTGACGACATGGTGGG750.19365833505474075No Hit
CATAGAGCTATCAGTATACTCCCACCATGATCTATGCGGACCATGCTCAC750.19365833505474075No Hit
CATAGAGAAGAGAAGGCGACAATGGCGTCAGTGTACTTCAGTTGACTATA740.19107622392067752No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG740.19107622392067752No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGCTACCGTGGGTGGTCTTACT730.18849411278661435No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG730.18849411278661435No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTAGAATTAGCGGAGAGTGA690.1781656682503615No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGC680.17558355711629828No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGATCTGAGCAAGGATAGCC680.17558355711629828No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG680.17558355711629828No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCAGACTTGTGCTCATACAGAAT680.17558355711629828No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG670.17300144598223507No Hit
CATAGACCACACCCAAACACCACGTAGGACTTCAGTTGACTATAAGAAAC660.17041933484817187No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT660.17041933484817187No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTGG650.16783722371410864No Hit
CATAGACTTGATGCCCAGGAAACCTCTGTGTAGAACCAGTGAGGCCTGAG620.160090890311919No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG610.1575087791778558No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG610.1575087791778558No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG610.1575087791778558No Hit
CATAGAATGCAGGAGAATATACACAGGTTAGGCCAGAATTAGCGGAGAGT600.15492666804379263No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA590.1523445569097294No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT590.1523445569097294No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC580.1497624457756662No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTACTGGGTGAGAAATGATG580.1497624457756662No Hit
CATAGAGGGTGTTTTTCGGTGTCACATAGAGGCTGCTTTTCTCTTCTTGG570.147180334641603No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTTACATCAGACATGTTTCCTAG570.147180334641603No Hit
CATAGATTCTCCCTTGTGCTTTTGGTCGACATGGTGGGTGCCTGATTGTT560.14459822350753976No Hit
CATAGACCACACCCAAACACCACGTATGTGCTCATACAGAATTAGATCTA550.14201611237347656No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTGTAGCTTGGGTGACAGAG550.14201611237347656No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG540.13943400123941335No Hit
CATAGACAGCTCACAGACTGCATACTTCAGTTGACTATAAGAAACACCTC530.13685189010535012No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT530.13685189010535012No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTTCAGTTGACTATAAGAAA530.13685189010535012No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTTGAGGAATTCTTGCCAGG510.13168766783722372No Hit
CATAGAGCTATCAGTATACTCCCACCATGACACTGTCAGACATGTTTCCT500.12910555670316048No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCGACATGGTTCTACACATAGAACC490.12652344556909728No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG480.12394133443503408No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACATGGTGGGTG480.12394133443503408No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC470.12135922330097086No Hit
CATAGACCCTTAGAGTTTCAGCCTCCAGGCAGTCTCAAACGTTGTGTCTA470.12135922330097086No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGATCTGCG470.12135922330097086No Hit
CATAGAGCTATCAGTATACTCCCACCATGAGGAATTCTTGCCAGGGATCT470.12135922330097086No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTACACTGACGACATGGTGGG460.11877711216690767No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC460.11877711216690767No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGGAGGCCTGAGATTGCTGCT460.11877711216690767No Hit
CATAGAACAAGGCCAGAATTACCCTGGAGACAGCCGCTCACCTCTATGAG450.11619500103284446No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACACTGACGACATGGTTCTACACA450.11619500103284446No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTGGGCAACAGAACAACAAC440.11361288989878125No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG410.10586655649659162No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGAATTAGCGGAGAGTGAGAACTCT410.10586655649659162No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTCGACATGGTGGGTGCCTGATTGT410.10586655649659162No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCAGCAGAATCAGGGTTGGTTCT390.1007023342284652No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)