FastQCFastQC Report
Wed 8 May 2024
EGAF00005806373

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806373
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences108822
Total Bases16.3 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2848226.173016485637095No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA47564.3704398007755785No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT30982.8468508206061274No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG25852.3754387899505613No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC24602.2605723107459887No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA21121.9407840326404586No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA19721.8121335759313375No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT17631.620076822701292No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA13741.2626123394166622No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA13451.2359633162412014No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA13321.2240172024039258No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA13191.2120710885666501No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG12851.1808274062230064No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT11761.0806638363566192No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA9140.8399036959438348No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA8940.8215250592711033No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT8580.7884435132601864No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG7050.6478469427137895No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA6980.6414144198783335No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC6720.6175221922037823No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATAGAACAGCTAAAAATCTT6490.5963867600301409No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT5590.5136828950028487No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA5430.49897998566466345No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA5420.4980610538310268No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG4800.4410872801455588No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA4790.44016834831192225No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT4740.43557368914373934No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT4640.42638437080737346No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA4600.4227086434728272No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC4530.4162761206373712No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC4400.4043300068000956No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGGTTCTACACA4370.40157321129918583No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA4300.39514068846372974No Hit
CATAGAGAACAGCCCTGAGAGAATGCCCTCCCTCATTATCCCTGTGCCTC3970.3648159379537226No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT3950.3629780742864494No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT3930.3611402106191762No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG3910.3593023469519031No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCGTTATCCTCAGCAAA3680.3381669147782618No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG3650.33541011927735204No Hit
CATAGAGCCTCCACTCTTCTCGCTATCTACGGAGATAGAGAGGTTGGTTC3610.3317343919428057No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG3580.32897759644189595No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC3470.31886934627189356No Hit
CATAGACTCTGTTTTGCTACCTGGGGCACAACTGGCATCTGGTGATCTAT3420.31427468710371065No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG3390.3115178916028009No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT3380.3105989597691643No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACGGACTACAAGTACCCAC3360.3087610961018912No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG3310.30416643693370826No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT3170.29130139126279614No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCACATAGAGAACAGCTAAAA3130.2876256639282498No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA3070.2821120729264303No Hit
CATAGACAGCTGGGGTGGGAGGTTAGACTTCACGGAGGAGAGGGTCATGG2980.2738416864237011No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC2970.27292275459006454No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2860.2628145044200621No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT2740.25178732241642315No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAACAGCTAAAAATCTTGG2590.23800334491187444No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2540.23340868574369153No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG2540.23340868574369153No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT2500.2297329584091452No Hit
CATAGACCCTCCTATCCCTTTTCCCCACACTGACGACATGGTTCTACACA2490.22881402657550864No Hit
CATAGATGCTTCTGATATGTTGCCGTACCTCTAACTTCATAGCACATCAT2390.2196247082391428No Hit
CATAGAAGTGACCCTCAGCTCAGTGATGACTCTCAGTTGTGTGTGTGGTC2290.210435389902777No Hit
CATAGAATACAACACACTCTCTGCCCTGTACGGAGATAGAGAGGTTGGTT2240.2058407307345941No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGTAAGAACATTAGCTTAGTTAA2160.19848927606550146No Hit
CATAGATGCTTCTGATATGTTGCCGTAGAACAGGGTGGGGAAAGAGAGCA2140.1966514123982283No Hit
CATAGATGTGCCACATACCTTTCCCAGGGTAATGGAGGAGTATGGGATCT2050.18838102589549907No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATCTCCCTCATTATCCCTGTGCCT2030.1865431622282259No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTAATGGAGGAGTATGGGATCTA1970.18102957122640642No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACAAGGACACTTTGGAC1960.18011063939276983No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG1960.18011063939276983No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG1940.17827277572549668No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCATAGAGACATGTGTGAGAGGG1870.1718402528900406No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACTGACGACATGGTTCTACACA1870.1718402528900406No Hit
CATAGATGTGCCACATACCTTTCCCACACGGACTACAAGTACCCACCACC1840.1690834573891309No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1830.1681645255554943No Hit
CATAGAGAACAGCCCTGAGAGAATGCATGGTTCTACACATAGAGAACAGC1830.1681645255554943No Hit
CATAGACCCCATGTGCAGTGTAAGCTATAGACATGTGTGAGAGGGAAGGA1810.16632666188822115No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTGGGGAAAGAGAGCACTCTAT1800.16540773005458453No Hit
CATAGACCCCATGTGCAGTGTAAGCTGACATGGTGGAGGGCTTTGCTGTT1700.15621841171821874No Hit
CATAGATGTGCCACATACCTTTCCCAGCCACTGCAAGCCTAACATCCCTC1660.1525426843836724No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGTGGCTGAGAAAGGAGGATCAC1630.14978588888276267No Hit
CATAGACGGGCCAGAGAATAGTGCTAGAAACTCCCATCTATGAGACCAAA1620.1488669570491261No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGAGAGGAGGGGGCAGAATA1580.14519122971457976No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAAGCTCTGCCTCCTGGGTTCACAC1580.14519122971457976No Hit
CATAGAATACAACACACTCTCTGCCCTGCACTGACGACATGGTTCTACAC1550.14243443421367005No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1440.13232618404366764No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTGGAGAGGAGGGGGCAGAAT1420.13048832037639446No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1420.13048832037639446No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATAGAACAGCTAAAAAT1400.1286504567091213No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTAACCTCAGCAAA1360.124974729374575No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTCTGCTACCGTAAGAACATTA1340.12313686570730183No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA1330.12221793387366525No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTGACGACATGGTTCTACACA1310.1203800702063921No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTGGCTGAGAAAGGAGGATCA1310.1203800702063921No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTCAGCAAA1310.1203800702063921No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTACCTGTAGTCCCAGATACTC1300.11946113837275552No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCCAGGTTCATGCCATTCTCCTGC1270.11670434287184576No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1220.11210968370366287No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC1220.11210968370366287No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT1200.1102718200363897No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCGTGAGGAGTAAAGATTCAGAAG1190.10935288820275312No Hit
CATAGAGCCTCCACTCTTCTCGCTATCATAGAACAGCTAAAAATCTTGGA1130.10383929720093363No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACTCAGGGTGGGGAAAGAGA1120.10292036536729705No Hit
CATAGACAGCTGGGGTGGGAGGTTAGCATGGATGCAGCCACTGCCTTTGG1100.1010825017000239No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTCTATGAGACCAAGTCTCTGCT1090.10016356986638732No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)