FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806380

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806380
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102905
Sequences flagged as poor quality0
Sequence length150
%GC46

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3688835.84665468150236No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG59235.755794179097226No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG50764.932704922015451No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT32543.162139837714397No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG28562.7753753461930906No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA17171.6685292259851319No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG15171.4741752101452796No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT13071.2701034935134348No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT12851.248724551771051No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC10301.0009231815752393No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT9830.955249987852874No Hit
CATAGAGAATACAATGAACTGTGATGGCACTTGGTCTCATAGAGAATACA9570.9299839657936931No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG9420.9154074146057043No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG8280.8046256255769885No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGATAGGGATAGTTTGAG6230.6054127593411398No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA5810.5645984160147709No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGAGCATTTTAACACAGC5380.5228123026092026No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC5130.4985180506292211No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGGGCTGGGATGACACGCA4950.4810261892036344No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA4870.4732520285700403No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGGCTTGTGAGGGCTGAAGT4810.4674214080948448No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG4770.46353432777804776No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG4510.4382683057188669No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC4440.43146591516447214No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA4400.427578834847675No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT4180.40619989310529125No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG4080.39648219231329873No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG3740.3634420096205238No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGCTAGGGTTACAGGCA3680.3576113891453282No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC3490.3391477576405422No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG3490.3391477576405422No Hit
CATAGAAGGTGATAATCATGACAGCCAAGGCTTGTGAGGGCTGAAGTCTA3480.338175987561343No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG3310.32165589621495555No Hit
CATAGAGCCTGGCATTTGAGGTAAGGTACGGTAGAGGCACTTGGTCCAGA3150.30610757494776736No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGTGTAGGGATAGTTTGAGGG2800.2720956221757932No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGACCTTTGACAAAGCAAACA2720.2643214615421991No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA2670.2594626111462028No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAGAACACTGGAATTACAGGTG2640.256547300908605No Hit
CATAGAACATCGCACACACATGGAACCATGTCGTCAGTGTACATGCCTAG2620.25460376075020646No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG2580.25071668043340944No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2520.2448860599582139No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATTTCTGACAAAGCAAACA2400.23322481900782274No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATCTTTGACAAAGCAAACA2360.2293377386910257No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGAGGCACTTGGTCCAGA2310.22447888829502938No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT2310.22447888829502938No Hit
CATAGACCATCCTCCCACCTTGACCTTCCCGGTAGCTGGGACTACAGGCA2280.22156357805743163No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACAGAAG2130.2069870268694427No Hit
CATAGAAGGTGATAATCATGACAGCCAAGCTATATAGAAGTACATGGTGG2090.20309994655264563No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG2070.20115640639424712No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGAAGAAGAAGGAGG2010.19532578591905156No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1920.1865798552062582No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1770.17200330401826927No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1710.1661726835430737No Hit
CATAGACCATCCTCCCACCTTGACCTCCCCAGTGCTGGAATTACAGGAGT1650.16034206306787815No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAAGTGCTGCGATTACAAGCA1570.15256790243428406No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTTGGATTACAGGTG1570.15256790243428406No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGTATTACAGGTG1560.1515961323550848No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1520.14770905203828774No Hit
CATAGACCATCCTCCCACCTTGACCTCCTAAAGCATTGGGATTACAGGCA1510.14673728195908847No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG1500.1457655118798892No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1490.14479374180068996No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT1420.1379913512462951No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1420.1379913512462951No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1390.13507604100869733No Hit
CATAGATGACATAGACCTTATACCCTCATCACCCAGTACAGGAGCACCCT1390.13507604100869733No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAATTTCTGGGATTACAGGGG1390.13507604100869733No Hit
CATAGACCATCTGCGCATCCTGTCTGCAGTAACTCACTGCTTCTAAGGAC1370.13313250085029882No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGGACTACAGGTG1350.1311889606919003No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAGGGATAG1350.1311889606919003No Hit
CATAGACCATCCTCCCACCTTGACCTGACTTGCTCTTTGACTTATGATGG1330.12924542053350177No Hit
CATAGACCATCTGCGCATCCTGTCTGGCTTCCCTGCTTGTCTTTCATCTA1310.12730188037510323No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1300.126330110295904No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTGGGATTACAGGCA1270.1234148000583062No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1270.1234148000583062No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1220.11855594966230991No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAATGCTAGGATTATAGGAG1180.11466886934551285No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGGG1160.11272532918711432No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTACTGGGATTATAGGCG1150.11175355910791507No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1150.11175355910791507No Hit
CATAGAGGGACGGAGGCAAGAGGATAGTTTGAGGGTAATGCTCTTTGACT1140.11078178902871581No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGATGGGTTTTTGCCAGATAGCT1120.10883824887031729No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATGACAGGCA1120.10883824887031729No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATCTTGACAAAGCAAACAA1110.10786647879111803No Hit
CATAGAGGGACGGAGGCAAGAGGATAGAGGCACTTGGTCCAGACTTTCTA1090.1059229386327195No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTATGTGTAGAACCATGTCGTC1080.10495116855352023No Hit
CATAGACCATCTGCGCATCCTGTCTGCCACCCCATCCTACATGTGTCTAT1070.10397939847432097No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTGTTGGGATTATAGGCGT1060.10300762839512172No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG1050.10203585831592245No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)