FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806382

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806382
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112568
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1242311.035996020183356No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG66955.947516168005117No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG55684.946343543458177No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG55434.924134745220667No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG44623.963826309430744No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC42383.764835477222656No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA35343.139435718854381No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG32402.8782602515812665No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA25562.270627531802999No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT21301.8921896098358326No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT21061.8708691635278232No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC18441.6381209579987208No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG16061.4266931987776277No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG15691.3938241773861133No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT14221.2632364437495558No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT12471.1077748560869876No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT10920.9700803070144268No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC10910.9691919550849264No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG10610.9425413971999147No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT9860.8759150024873853No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT9500.8439343330253714No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT9300.8261672944353635No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA7630.6778125222087982No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT7220.6413900930992822No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT7160.6360599815222798No Hit
CATAGATGGGACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGCAACT7040.6253997583682752No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT6670.5925307369767607No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG6550.581870513822756No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCTAGGATTTGAGCTCATG6280.5578850117262455No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGCCCGTTCTCTCTGTTGTGTC6010.533899509629735No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG5970.5303461019117334No Hit
CATAGACCAGTACGCCTTACCCCTTGGGCTGGTGTTTTCCTTGATCTATG5840.5187975268282283No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGTCTGAGAAAAGATGCA5770.5125790633217255No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC5750.5108023594627248No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG5670.5036955440267216No Hit
CATAGATCTAGCCCATCACTTCAGCATCATACCCTGGGAGAAGAAATGTT5130.45572453983370054No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT5090.4521711321156989No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGATGGGAGTGTCTGC5080.45128278018619855No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGAGCATGCCTTTGAT4970.44151090896169426No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG4230.37577286617866534No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC4150.3686660507426622No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG4120.36600099495416105No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG3950.3508990121526544No Hit
CATAGAGCAAGCCCTCTAAGCCTATCACTCTCCCACCATTCAGACTCTAT3820.3393504370691493No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACACTGTCATTGTGGGTTTTAACT3680.32691351005614383No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG3680.32691351005614383No Hit
CATAGATGGCAAATGGTGGGATCTCTATGCCATGCTGAAGTCCCATGATC3590.31891834269064034No Hit
CATAGAAGTATTCACACTGGGGCCCAGCCACGGTCAGTTCCCACAGCCAC3110.27627745007462157No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTTGGGCTGGTGTTTTCCT3060.2718356904271196No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT3040.27005898656811883No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTACGAATGAGGAAACAGGCACTC2940.2611754672731149No Hit
CATAGACCAGTACGCCTTACCCCTTGGTGCTGGAATAGTTGGACTCTATG2830.2514035960486106No Hit
CATAGACCCTCTCTTACCCTTCCACCACCCTGACGAATGAGGAAACAGGC2670.23718996517660437No Hit
CATAGAACATTGATTCCTGGCATGTCCGTCAGTGTAGCCCGTTCTCTCTG2590.23008314974060123No Hit
CATAGATGGCAAATGGTGGGATCTCTGTATGCTTTATTCTCACGTGGATC2560.22741809395210008No Hit
CATAGACCCTCTCTTACCCTTCCACCCACCAACATGCTTTTAGTCACGTC2510.2229763343045981No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC2460.21853457465709616No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGTGCTCGTATCTTGG2400.2132044630800938No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGCATGCCTTTGATAAAACATC2390.21231611115059343No Hit
CATAGATCTAGCCCATCACTTCAGCATCATATGAGCATGCCTTTGATAAA2380.21142775922109303No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTCAGTGTGTTACAAAAATTGGGA2380.21142775922109303No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA2280.20254423992608914No Hit
CATAGACCAGTTACCACAAGAAGCAATGGACTGTTAATATAGAAGAGACA2190.1945490725605856No Hit
CATAGATGCCACCACACCCAGTTAATTTTGTCTTTTTAGTAGAGATGGGA2170.19277236870158482No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTAGACCATGGAGAGAAT2130.18921896098358326No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT2080.1847772013360813No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACACACTGACCAACATGCTTTTA2000.17767038590007816No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2000.17767038590007816No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA1990.1767820339705778No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACAGTTGTGGAAAGTG1990.1767820339705778No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC1940.17234027432307583No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT1890.16789851467557387No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG1890.16789851467557387No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGACGAATG1850.16434510695757232No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACTGTTAATATAGAAGAGACACA1780.15812664345106955No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC1780.15812664345106955No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT1780.15812664345106955No Hit
CATAGAACTTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG1730.15368488380356762No Hit
CATAGACCAGTTACCACAAGAAGCAATGGGTCATTGTGAGGATTAAATGT1630.1448013645085637No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG1600.14213630872006253No Hit
CATAGACCAGTTACCACAAGAAGCAATGTGCTCGTATCTTGGCCATCTAT1570.13947125293156137No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG1510.134141141354559No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGGGTCATTGTGAGGA1500.13325278942505864No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGTGGGTTGAGGGAGTC1450.12881102977755668No Hit
CATAGACCCTCTCTTACCCTTCCACCCTTCCTTTCAATAGCCTTTTAGGT1410.12525762205955512No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1380.12259256627105393No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG1370.12170421434155355No Hit
CATAGACCAGTACGCCTTACCCCTTGCACTCCCATGATTTACCATCACAA1340.11903915855305239No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCCAGGCCCTTCAGCATCA1290.11459739890555042No Hit
CATAGAGCAGCTTGAATTCTCCTCAGAAAATGGGATTTTCTTTTCTATTG1290.11459739890555042No Hit
CATAGATCTAGCCCATCACTTCAGCACAGGCCCTTCAGCATCATTTCTAT1280.11370904697605004No Hit
CATAGATCTAGCCCATCACTTCAGCATGCAGGCCCTTCAGCATCATTTCT1270.11282069504654964No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTGCAGGCCCTTCAGCATCAT1260.11193234311704925No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTTGTGGAAAGTGCAATGAGTCTAT1240.11015563925804847No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTA1170.10393717575154574No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAAGCTATAAAGACATGCCTGG1160.10304882382204533No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGACATGCCTGGCCAACTGTT1130.10038376803354417No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)