FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806391

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806391
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences159887
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA144179.01699325148386No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC103276.458936623990693No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC87635.480745776704798No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC80865.057321733474266No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA55673.481834045294489No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG52593.289197996084735No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT49103.0709188364282274No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG45972.8751555786274055No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT39452.467367578352211No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA38522.4092014985583567No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG31121.9463746270803755No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT28811.8018975901730596No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA28141.759992995052756No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC27801.7387279766334973No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT24221.5148198415130687No Hit
CATAGACTTGATGCCCAGGAAACCTCAGACATGTTTCCTAGTTTCAGTTC19731.2339965100352124No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA18911.1827102891417063No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC15300.9569258288666371No Hit
CATAGATTCTCCCTTGTGCTTTTGGTGGTTCTACACATAGATTCTCCCTT14680.9181484423374008No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT13700.856855153952479No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG13340.8343392520967934No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGC13040.8155760005503887No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC11900.744275644674051No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC11380.7117526753269497No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT11350.7098763501723092No Hit
CATAGACTTGATGCCCAGGAAACCTCGGCAGTGAGGTACAGAAATCTATG10020.6266926016499152No Hit
CATAGACTTGATGCCCAGGAAACCTCTATACTTCAGTTGACTATAAGAAA9590.5997986077667353No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC9410.5885406568388925No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT9400.587915215120679No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTAGCTTGGGTGACAGAGTG9380.5866643316842519No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT9150.5722791721653419No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG9040.5653993132649934No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTGGGTGGTCTTACTCTTCC8710.5447597365639484No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT7920.4953498408250827No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT7430.46470319663262183No Hit
CATAGAGCTATCAGTATACTCCCACCATGATCTGAGCAAGGATAGCCCTC7400.4628268714779813No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT6620.4140424174573293No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC5680.3552508959452613No Hit
CATAGAACAAGGCCAGAATTACCCTGGGCAACAGAACAACAACATCTATG5380.3364876443988567No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG5310.3321095523713623No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGGAGACAGCCGCTCAC5230.32710601862565436No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGGGTG5190.3246042517528004No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC5180.3239788100345869No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG5090.31834983457066557No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTGCTGCTTTTCTCTTCTTG5080.317724392852452No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACTCTTCACTATG4950.30959365051567667No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGAGACAGCCGCTCACCTCTA4920.30771732536103624No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC4860.3039646750517553No Hit
CATAGACAGGAGGAGGAAGAAGAGGACCATGCTCACACCTTGATCTATGA4700.2939576075603395No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC4660.29145584068748553No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGGGGTGGTCTTACTCT4410.2758197977321483No Hit
CATAGACTTGATGCCCAGGAAACCTCCACTGACGACATGGTTCTACACAT4410.2758197977321483No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACACTCAGACATGTTTCCTA4400.2751943560139348No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTGG4330.27081626398644043No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA4320.27019082226822694No Hit
CATAGACTTGATGCCCAGGAAACCTCACATAGAGAATTAGCGGAGAGTGA4310.26956538055001344No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTACTGGGTGAGAA4200.2626855216496651No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGACGACATGGTGGGTGCC4160.2601837547768111No Hit
CATAGAGAATTTGTACACCACGGGACATGGATGAAGCTGGATCTATGAGA4090.2558056627493167No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC4060.25392933759467623No Hit
CATAGATTCTCCCTTGTGCTTTTGGTGGTCTTACTCTTCCCGTCTATGAG3810.23829329463933902No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTGACTTGTGCTCATACAGAATTAG3800.23766785292112552No Hit
CATAGAACAATGTAATAAGCATCGGAGGAACACTGACGACATGGTTCTAC3670.2295371105843502No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT3380.21139930075615904No Hit
CATAGAGAAGAGAAGGCGACAATGGGTGGTCTTACTCTTCCCGTCTATGA3320.20764665044687808No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACACTCAGACATGTTTCCTAGTTT3190.19951590811010275No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC3160.1976395829554623No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCAGTCTCAAACGTTGTG3120.19513781608260836No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT3080.19263604920975438No Hit
CATAGATGTCTCCTAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC2940.18387986515476554No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGACTCTTCACT2900.18137809828191162No Hit
CATAGACCCTTAGAGTTTCAGCCTCCAGCAGAATCAGGGTTGGTTCTATG2880.18012721484548463No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTTC2870.17950177312727114No Hit
CATAGAGGGTGTTTTTCGGTGTCACATGGTGGGTGCCTGATTGTTCTATG2820.1763745645362037No Hit
CATAGATGTCTCCCAGGCTAGAGTGCTCATACAGAATTAGATCTAGCTCT2680.16761838048121486No Hit
CATAGAGCTATCAGTATACTCCCACCATGAGGCCTGAGATTGCTGCTATC2660.16636749704478787No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG2650.1657420553265744No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT2630.16449117189014742No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGAGACATGGTGGGTGCCT2620.16386573017193393No Hit
CATAGACAGCTCACAGACTGCATACTTCAGTTGACTATAAGAAACACCTC2590.16198940501729345No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG2570.1607385215808665No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGGCTGCTTTTCTCTTC2450.15323322096230463No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACATGGTGGGTG2440.15260777924409114No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATCGTCCGCAGTTGTTCTTTC2440.15260777924409114No Hit
CATAGACAGCTCACAGACTGCATACTACACTGGGACATGGATGAAGCTGG2420.15135689580766415No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTTCTGAGGAATTCTTGCC2420.15135689580766415No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGGGACATGGATGAAGCTGG2360.14760424549838325No Hit
CATAGAACAATGTAATAAGCATCGGAGGAACACTGACGACATGGGCAACA2220.1388480614433944No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGACATGGTGGGTGCCT2210.1382226197251809No Hit
CATAGAATGCAGGAGAATATACACAGGTTGACATGGTGGGTGCCTGATTG2150.13446996941589998No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTGGGTGCCTG2140.1338445276976865No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGGACATGGATGAAGCTGGA2120.13259364426125952No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTAAGCTTGGGTGA2100.13134276082483254No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTCTGGGAGAGGCTGTTTGA2050.1282155522337651No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTACTTCAGTTGACTATA1990.12446290192448417No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT1930.12071025161520324No Hit
CATAGACTTGATGCCCAGGAAACCTGAGACTGTGCTCATACAGAATTAGA1920.12008480989698975No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGGGCAACAGAACAACA1840.11508127615128184No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCCCAGTATTTCATTATTAAAA1750.10945230068736046No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGGACATGGATGAAGCTGGATCTA1700.106325092096293No Hit
CATAGAGCTATCAGTATACTCCCACCATGGTGGGTGCCTGATTGTTCTAT1700.106325092096293No Hit
CATAGAATGCAGGAGAATATACACAGCTTGGGTGACAGAGTGAGTCTATG1690.10569965037807952No Hit
CATAGAGAAGAGAAGGCGACAATGGGACATGGATGAAGCTGGATCTATGA1690.10569965037807952No Hit
CATAGACCCTTAGAGTTTCAGCCTCAGACATGTTTCCTAGTTTCAGTTCT1670.10444876694165255No Hit
CATAGACAGCTCACAGACTGCATACTCATGGTTCTACACATAGATCATGG1660.10382332522343904No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTATGGGCAACAGA1640.10257244178701208No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCATAGAACCCAAAGAGTGAGCCCT1610.10069611663237162No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)