FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806392

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806392
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences159887
Sequences flagged as poor quality0
Sequence length150
%GC34

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT147689.236523294576795No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG112767.0524808145752935No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG88305.522650371825102No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA81725.111109721240626No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG58853.6807245116863783No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA55533.4730778612395006No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT49413.0903075296928457No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG47262.9558375602769456No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT40382.525533658146066No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT39652.479876412716481No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG31721.9839011301731848No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT29291.8319187926473073No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT28871.8056502404823407No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA27611.726844583987441No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT24881.5560989949151587No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGGTTTCCTGGGCATCAAGTC20371.2740247800008757No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT19601.225865767698437No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG16371.0238480927154803No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA16081.0057102828872893No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA15730.983819822749817No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT13620.851851620206771No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG13330.8337138103785798No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA11990.7499046201379724No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC11630.7273887182822869No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA11420.7142544421998036No Hit
CATAGATTTCTGTACCTCACTGCCGAGGTTTCCTGGGCATCAAGTCTATG10150.6348233439866906No Hit
CATAGACTCACTCTGTCACCCAAGCTACACTGAAACATTTTCTGGTCAGC9770.611056558694578No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTATAGAGGTTTCCTGGGCAT9690.6060530249488701No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC9610.6010494912031622No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG9430.5897915402753194No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA9370.5860388899660386No Hit
CATAGACGGGAAGAGTAAGACCACCCACACTGAAACATTTTCTGGTCAGC8810.5510141537460832No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT8210.5134876506532738No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT7940.4966007242615097No Hit
CATAGAGGGCTATCCTTGCTCAGATCATGGTGGGAGTATACTGATAGCTC7340.4590742211687004No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG6870.42967846041266644No Hit
CATAGAGAAGCTTTGAGATTTGTGTCTGTTCTATGTGTAGAACCATGTCG6100.3815194481102278No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC5970.3733887057734525No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC5540.34649471189027253No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGGTAATTCTGGCCTTGTTCTATG5430.33961485298992417No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGAGGCAAGGGTACTATTTTGA5400.33773852783528363No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAGGCAAGGGTAC5390.3371130861170702No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCACACTGAAACATTTTCTGGTCAG5270.32960778549850833No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC5160.32272792659815996No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG5040.3152226259795981No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC4980.3114699756703172No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGAAAGTTGGAACCTATCAGTGTCTA4940.30896820879746323No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCTCATAGAGAAGCTTTGAGA4850.3033392333335418No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCTTCTTCCTCCTCCTGTCTATGT4730.29583393271497993No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTTCCCCAATATGAACAG4620.28895407381463156No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA4580.2864523069417776No Hit
CATAGACGGGAAGAGTAAGACCACCCCATAGAGAAGCTTTGAGATTTGTG4470.2795724480414292No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTCTATGTGAGGTTTCCTGGGCAT4430.2770706811685753No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACTATGGCTTAATG4390.2745689142957214No Hit
CATAGAGCCATCATCATTTCTCACCCAGTACGGTAGCAGAAGCTTTGAGA4280.267689055395373No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT4220.26393640508609206No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG3950.24704947869432786No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGTCAGGTAAACAAACTT3830.23954417807576603No Hit
CATAGACGGGAAGAGTAAGACCACCAAAAGCACAAGGGAGAATCTATGTG3810.23829329463933902No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTATGTGTAGAACCATGTCGTCAG3590.22453357683864228No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG3490.2182791596565074No Hit
CATAGACGGGAAGAGTAAGACCACCCATTGTCGCCTTCTCTTCTCTATGT3280.20514488357402416No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTTGTGACACCGAAAAAC3250.20326855841938368No Hit
CATAGACACAACGTTTGAGACTGCCTGGGAGACCCCATATCTACCAAAGA3080.19263604920975438No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT3080.19263604920975438No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCATGTCGTCAGTGTACCAAA2960.18513074859119252No Hit
CATAGAACAATCAGGCACCCACCATGTGACACCGAAAAACACCCTCTATG2900.18137809828191162No Hit
CATAGAACCAACCCTGATTCTGCTGGAGGCTGAAACTCTAAGGGTCTATG2900.18137809828191162No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG2860.17887633140905765No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTCTAGCCTGGGAGACATCT2780.17387279766334973No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTCTATG2710.16949470563585534No Hit
CATAGATCCCTGGCAAGAATTCCCCAATATGAACAGAAAGAAGCTCTATG2710.16949470563585534No Hit
CATAGATAGCAGCAATCTCAGGCCTCATGGTGGGAGTATACTGATAGCTC2710.16949470563585534No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTATGCAGTCTGTGAGCTGTC2590.16198940501729345No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAACCTGTGTATATT2550.1594876381444395No Hit
CATAGAACAATCAGGCACCCACCATGTCTCAGTGTAGGTAAACAAACTTC2540.158862196426226No Hit
CATAGAGGAAAGAACAACTGCGGACGATAGAGGCAAGGGTACTATTTTGA2540.158862196426226No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATAGAGAAGCTTTGAGATTTGT2530.15823675470801252No Hit
CATAGATCCCTGGCAAGAATTCCTCAGAAGCAGAAGCTTTGAGATTTGTG2470.15448410439873161No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAGTATGCAGTCTGTGAGCT2440.15260777924409114No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTGAGGTTTCCTGGGCATCAA2420.15135689580766415No Hit
CATAGAACAATCAGGCACCCACCATGTCATAGAGAAGCTTTGAGATTTGT2210.1382226197251809No Hit
CATAGACTCACTCTGTCACCCAAGCTTACGGTAGCAGAAGCTTTGAGATT2200.1375971780069674No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTTCCTCCGATGCT2200.1375971780069674No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGTGACACCGAAAAA2160.13509541113411347No Hit
CATAGAACAATCAGGCACCCACCATGTCAACCTGTGTATATTCTCCTGCA2150.13446996941589998No Hit
CATAGATCTCAAACAGCCTCTCCCAGACACTGAAACATTTTCTGGTCAGC2140.1338445276976865No Hit
CATAGATCCAGCTTCATCCATGTCCCCAGGAAAGTTGGAACCTATCAGTG2080.13009187738840555No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCATGATCTATGTGTAGA2040.1275901105155516No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC2030.12696466879733811No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGTCTCAGGTTTCCTGGGC1950.12196113505163021No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTACACTGACGCCATGCTGAA1940.12133569333341672No Hit
CATAGATGTTGTTGTTCTGTTGCCCATAGAGAAGCTTTGAGATTTGTGTC1850.11570671786949532No Hit
CATAGAGAAACTTTTAATAATGAAATACTGGGGGAGACCCCATATCTACC1830.11445583443306835No Hit
CATAGACTCACTCTGTCACCCAAGCTGTGTATATTCTCCTGCATTCTATG1720.10757597553271998No Hit
CATAGATCAAGGTGTGAGCATGGTCCCATGATCTATGTGTAGAACCATGA1720.10757597553271998No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGGCTGAAACTCTAAGGGTCT1700.106325092096293No Hit
CATAGAACAATCAGGCACCCACCATGGTGGGAGTATACTGATAGCTCTAT1690.10569965037807952No Hit
CATAGATCCAGCTTCATCCATGTCCCATTGTCGCCTTCTCTTCTCTATGT1690.10569965037807952No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCTCTTCTTCCTCCTCCTGTCTA1690.10569965037807952No Hit
CATAGAAAGGGACAAGGGCTCACTCTTCTGCTGCTCACTCTTTGGGTTCT1680.10507420865986603No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGCTGCTGCTCACT1640.10257244178701208No Hit
CATAGATGTTGTTGTTCTGTTGCCCATACGGTAGCAGAAGCTTTGAGATT1630.10194700006879859No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)