FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806394

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806394
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences198116
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT196359.910860304064286No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG101195.107613721254214No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG84314.255587635526662No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG82134.145551091279856No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG56822.868016717478649No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA50882.5681923721456115No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG50742.5611258050838903No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC47562.4006137818247897No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT43752.2083022067879425No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC39431.9902481374548242No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT37961.9160491833067494No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT35461.78986048577601No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA34541.743423045084698No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG32191.6248056694058026No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA26391.3320478911344869No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC25801.3022673585172324No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG24571.2401825193321085No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG21731.0968321589371883No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC21111.065537361949565No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG20541.0367663389125563No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT18190.9181489632336611No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT16770.846473783036201No Hit
CATAGACCCCATGACTCAGCTCCTCAATCCTGTGTTCATGGCTTCTATGT16510.833350158493004No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT16200.8177027599991924No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT14130.7132185184437401No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT13100.6612287750610752No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT11300.5703729128389429No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG11250.567849138888328No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG10590.5345353227402128No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTAGCCCGTTCTCTCTGT10390.5244402269377536No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT9890.4992024874316057No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA9640.48658361767853175No Hit
CATAGATTCCTCCAAAGACTGCAGGGGTCAGTCTTCAGCCCACCCATGCC9070.45781259464152313No Hit
CATAGAAGTCTCGCTCTGTCATGCAACAACAACAAAACTCGTGACTTCTA9050.4568030850612772No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTGCCTCTCCAGTTTCTACG8500.42904157160451456No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC8160.4118799087403339No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG8030.4053180964687355No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG7910.39926103898726No Hit
CATAGACCAGTTACCACAAGAAGCAATGCCTGGCCAACTGTTTTTTCTAT7860.3967372650366452No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT7650.3861374144440631No Hit
CATAGAGCAACCCCAGCAGTTTGAGACCATGGAGAGAATAATCCGTCTAT7550.3810898665428335No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG6890.34777605039471826No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGATGGGAGTGTCTGC6780.3422237477033657No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGGGGTCCTAAATGTCTTTG6740.34020472854287387No Hit
CATAGACCCTCTCTTACCCTTCCACCTACGGTAGTAAAGGCTGGGGTCTT6690.33768095459225905No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGCCTCTCCAGTTTCTA6620.33414767106139837No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTACCAACATGCTTTTAGTCACG6520.3291001231601688No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTAACACGCACAAAGGCACTGTC6270.3164812534070948No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTACACTGTCATTGTGGGTTTTAAC6030.3043671384441438No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGTTATAGAAAACAAGGA5980.30184336449352905No Hit
CATAGATTCAGTTTACTTAGAGGCAGACACAGCACCAACATGCTTTTAGT5820.2937672878515617No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTATGATGGGAGTGTCTGCTGGT5800.29275777827131577No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC5770.29124351390094694No Hit
CATAGATTCAGAGAAGGACAGCGTGGACACTGTCATTGTGGGTTTTAACT5580.2816531728886107No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT5520.27862464414787297No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT5360.27054856750590567No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGGGTCATTGTGAGGA5260.26550101960467604No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACTACGGTAGCCCGTTCTCTCTG5140.25944396212320053No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGTGCTCGTATCTTGG4850.24480607320963477No Hit
CATAGACCCTCTCTTACCCTTCCACCATTCAGACTGGGCTGGTGTTTTCC4710.23773950614791334No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG4700.23723475135779037No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC4630.2337014678269297No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG4560.23016818429606897No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT4490.22663490076520826No Hit
CATAGAACATTGATTCCTGGCATGTCCCAGTGTACCAACATGCTTTTAGT4450.2246158816047164No Hit
CATAGACCAGTTACCACAAGAAGCAATGTCGTCAGTGTGGTGCTGGAATA4440.22411112681459347No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTACCCTGGGAGAAGAAATGTTG4250.21452078580225728No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTTGTCAGACCCAGGCTA4160.20997799269115064No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA4130.20846372832078178No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGTTACAAAAATTGGGA4000.20190191604918328No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTAACTGGCTTGATTGCA3920.19786387772819966No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTACACTGTCAGACCCAGGCTACAC3810.1923115750368471No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACAGTTGTGGAAAGTG3800.19180682024672413No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGTGGGTTGAGGGAG3770.19029255587635527No Hit
CATAGACCAGTTACCACAAGAAGCAATGTTCTATGAGACCAACATGCTTT3710.18726402713561752No Hit
CATAGAGGCTGCAGTGAACAATGATCGACACTGTCATTGTGGGTTTTAAC3690.18625451755537162No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGGGTCCTAAATGTCTT3630.18322598881463384No Hit
CATAGATGGCAAATGGTGGGATCTCTATGGCCATGCTGAAGTCCCATGAT3590.181206969654142No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATGTCGTCAGTGTAGATCTC3410.1721213834319288No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGTGCATTAGGAAGTCTTCTCA3360.16959760948131397No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGCATGCCTTTGATAAAACATC3200.16152153283934664No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3180.16051202325910072No Hit
CATAGATGGGACAGCGACAATGACAGTGTTGTTACAAAAATTGGGAAGCG3070.1549597205677482No Hit
CATAGATGCCACCACACCCAGTTAATATGGTGGGTTGAGGGAGTCTTCTC3070.1549597205677482No Hit
CATAGATGGCAAATGGTGGGATCTCTACACTGTCATTGTGGGTTTTAACT3060.15445496577762524No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG3040.15344545619737932No Hit
CATAGACCCTCTCTTACCCTTCCACCTAGATGCCTGGCCAACTGTTTTTT2950.1489026630862727No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACTGTTAATATAGAAGAGACACA2930.14789315350602678No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCAACATGCTTTTAGTCAC2910.14688364392578085No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTACGAATGAGGAAACA2880.145369379555412No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTACGAATGAGGAAACAGGCACT2800.1413313412344283No Hit
CATAGATCTCCTCTCTGTAATGCACCAACATGCTTTTAGTCACGTCTATG2770.13981707686405942No Hit
CATAGAACATTGATTCCTGGCATGTCCTACTTCTGTTACAAAAATTGGGA2730.1377980577035676No Hit
CATAGAAGTATTCACACTGGGGCCCATGTCGTCAGTGTATGATGGGAGTG2720.13729330291344463No Hit
CATAGATCTAGCCCATCACTTCAGCACTCTCCCACCATTCAGACTCTATG2680.13527428375295283No Hit
CATAGATTCCTCCAAAGACTGCAGGCCCTTCAGCATCATTTCTATGTGTA2660.1342647741727069No Hit
CATAGACCAGTTACCACAAGAAGCAATGGGTCATTGTGAGGATTAAATGT2600.13123624543196916No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA2560.12921722627147733No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGGAGTCTTCTCTATGTGTAGAACCA2550.12871247148135437No Hit
CATAGACCCTCTCTTACCCTTCCACCGTATGTATGCTTTATTCTCACGTG2540.1282077166912314No Hit
CATAGACCCTCTCTTACCCTTCCACCACACTGTCATTGTGGGTTTTAACT2480.12517918795049365No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATATGAGCATGCCTTTG2470.12467443316037069No Hit
CATAGACCAGTTACCACAAGAAGCAATGTCGTCAGTGTGTAAAGGCTGGG2420.12215065920975589No Hit
CATAGATGACATGGGAAATTATGCTGCTACCGTATGTTACAAAAATTGGG2380.12013164004926406No Hit
CATAGACCCTCTCTTACCCTTCCACCTACGGTGCATAAAAACTGTCGGAG2380.12013164004926406No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG2330.11760786609864929No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGACTGTTAATATAGAA2310.11659835651840336No Hit
CATAGATTCAGAGAAGGACAGCGTGGTCACATAGGTTGCTAGACAGATTT2310.11659835651840336No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCCTTCAGCATCATTTCTATG2280.11508409214803449No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACAGACCATGGAGAGAATAATCC2280.11508409214803449No Hit
CATAGAACATTGATTCCTGGCATGTCCCCATTGTAGATTTCTTTCACCTC2280.11508409214803449No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTTCCCATGATTTACCATCACAA2240.11306507298754266No Hit
CATAGATGGGACAGCGACAATGACAGACCCAGGCTACACATCTATGTGTA2170.10953178945668195No Hit
CATAGATTCTTTCCTGGCTGTGGGTGTAACACTGACGAATGAGGAAACAG2050.10347473197520644No Hit
CATAGAGCAACCCCAGCAGTTTGAGAGGAATCTAGTGCATAAAAACTGTC2000.10095095802459164No Hit
CATAGATGGTATTTGAGTGGGGAAACAGAGTTATAGAAAACAAGGAGAAC2000.10095095802459164No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)