FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806396

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806396
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences169148
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG102796.0769267150660955No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT85465.052380164116632No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT77664.591245536453283No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG65813.890675621349351No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT52813.122117908577104No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT52053.0771868422919573No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT47732.8217892023553337No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT45882.712417527845437No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT36132.135999243266252No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT32881.9438598150731905No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG31041.8350793388038875No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG22381.3231016624494525No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT21131.249201882375198No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT20731.2255539527514367No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG20051.1853524723910422No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG18481.0925343486177785No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC16380.968382718093031No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT15990.9453259867098637No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC15330.9063069028306572No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT14460.854872655898976No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT14390.8507342682148178No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT13890.821174356185116No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT12920.7638281268474945No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG12860.7602809374039302No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG11830.6993875186227446No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC11510.6804691749237355No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT11370.6721923995554189No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA10880.6432236857663112No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACACTGCTCACGATGGTATTACA10330.6107077825336392No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC10170.6012486106841346No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATGTTTGCTATTACGAGGATGCTC9310.5504055619930475No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT9120.5391727954217609No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA8370.4948329273772081No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG8330.49246813441483195No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG7940.4694114030316646No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC7900.46704661006928844No Hit
CATAGACACTTGACCATGCCCTTGTTCAGACACTTGAAAGCTCCCTGGAT7890.46645541182869443No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT7890.46645541182869443No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG7880.4658642135881004No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT7860.4646818171069123No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA7670.4534490505356256No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT7630.4510842575732495No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG7630.4510842575732495No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT7300.4315747156336463No Hit
CATAGAAAAGGGAGGGATTACGGGTGGATCTCAGAGTTAGCTTGCCTCTA7190.42507153498711187No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC7110.42034194906235955No Hit
CATAGACAGGGGCCAGAACTCCTAAGTAGACAGGGGTGTGGTGTTCTGTC7070.4179771560999835No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAATGTTTGCTATTACGAGGA6950.410882777212855No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCATGCTGAAGTCCCATGATCTAT6710.39669401943859817No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT6700.3961028211980041No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC6470.3825052616643413No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATAGACAGGGGTGTGGTGT6460.38191406342374723No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA6330.3742284862960248No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC6290.3718636933336486No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG6220.3677253056494904No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT5800.3428949795445409No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA5720.3381653936197886No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT5520.3263414288079079No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACCTGTGTGTGTAAGTGGGTCTAT5340.3156998604772152No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTACGGTTGCAGGATGAATGG5100.30151110270295833No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT5090.30091990446236433No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT4920.2908695343722657No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT4730.279636767800979No Hit
CATAGATGGCCCACTGACATTTTCCTCTGCTTTTACAAACTCAAGTGATT4460.26367441530494007No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT4430.26190082058315794No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT4390.2595360276207818No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT4340.25658003641781163No Hit
CATAGAACTAGTTCCAGCACCACCAGTAGAACTTTCCCACCGCCCTTTTC4330.25598883817721757No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT4290.25362404521484144No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATCTAGCTAACTTCGCCTGCCTT4290.25362404521484144No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT4270.2524416487336534No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTAGAATCTTGAACTCAGGAGTC4240.25066805401187126No Hit
CATAGAACTGTCCCCTACTTTTCACCAGGAGTTGACAAACGACAGCTTCT4190.24771206280890107No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC4120.24357367512474284No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC4060.2400264856811786No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAAGCAGGAGTTGACAAACGACAGC3990.23588809799702037No Hit
CATAGACTTGTTGCCGAGACTGGAGTGTTGCCAAGTAAGTCTACAAAGAA3960.23411450327523825No Hit
CATAGACACTTGACCATGCCCTTGTTCTGACACTTGAAAGCTCCCTGGAT3750.2216993402227635No Hit
CATAGACACTTGACCATGCCCTTGTTCACATAGATGTCCTCTTCACCTCC3700.21874334901979334No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCGTCAGTGTACATGTACACG3690.2181521507791993No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGACACATAGATGTCCTCTTCACC3690.2181521507791993No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTGTCTAGGATGAGAT3680.21756095253860525No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGGGCTGCATGGTGACTTTTCTA3670.2169697542980112No Hit
CATAGAACTAGTTCCAGCACCACCAGACACTTGAAAGCTCCCTGGATCTA3610.213422564854447No Hit
CATAGACTCAGAACTGGCTCTAATTCCTACGGTAGGTGGCTTCTGGTGCA3590.2122401683732589No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC3430.20278099652375434No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC3360.1986426088395961No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT3330.196869014117814No Hit
CATAGAAGAGAACCAAAAATGGACCCAAGGTCAAGGGCAGGGATTCTATG3220.19036583347127958No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG3210.18977463523068555No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC3060.18090666162177502No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCCTCTTCACCTCCCAGATCTATG3060.18090666162177502No Hit
CATAGACACTTGACCATGCCCTTGTTCGACTTGGTCTCATAGACACTTGA2970.1755858774564287No Hit
CATAGATGGCCCACTGACATTTTCCTTACGGTTGCAGGATGAATGGGGAC2970.1755858774564287No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC2970.1755858774564287No Hit
CATAGACAGGGGCCAGAACTCCTAAGTACGGTTGCAGGATGAATGGGGAC2940.17381228273464658No Hit
CATAGATGGCCCACTGACATTTTCCTACGGTTGCAGGATGAATGGGGACA2900.17144748977227045No Hit
CATAGAACATCTCCCTGTTCCTCCCATACGGTTGCAGGATGAATGGGGAC2890.17085629153167642No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2840.1679003003287062No Hit
CATAGAACTGACCATACACTTGCCCTACACTGACAGGGGTGTGGTGTTCT2820.16671790384751817No Hit
CATAGACAGGGGCCAGAACTCCTAAGAGACAGGGGTGTGGTGTTCTGTCT2810.1661267056069241No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT2790.16494430912573604No Hit
CATAGAAAAGGGAGGGATTACGGGTGCTCTATGCATTCTTTCTCCAGACC2720.1608059214415778No Hit
CATAGACACTTGACCATGCCCTTGTTCACACTGAACGAAATTTAGGTGAG2660.15725873199801357No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTACGGTTGCAGGATGAATGGGGA2630.15548513727623145No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCCAAGGTCAAGGGCAGGGATTCT2600.15371154255444935No Hit
CATAGACACTTGACCATGCCCTTGTTCAGATGGGTCCCAAAGTAGGCAAT2510.14839075838910304No Hit
CATAGACGTGTGGTTGGGATGTCAGCATAGATGTGGTTGCATGGGGGTCT2500.147799560148509No Hit
CATAGAACTAGTTCCAGCACCACCAGCTCCTCTTCTCTTCCCTCTATGTG2470.14602596542672688No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG2400.14188757774256863No Hit
CATAGATGGCCCACTGACATTTTCCTATGTGTAGAACCATGGAACTTTCC2370.14011398302078654No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA2360.1395227847801925No Hit
CATAGACTCAGAACTGGCTCTAATTCCTCTGCTTTTACAAACTCAAGTGA2230.13183720765247003No Hit
CATAGACCAGGACAATCACAGGGCACACTGAACGAAATTTAGGTGAGCAG2170.12829001820890581No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGGCTGAGAAGGTAGGTGGCTTCT2150.12710762172771775No Hit
CATAGAACTAGTTCCAGCACCACCAGGAGTTGACAAACGACAGCTTCTAT2140.12651642348712372No Hit
CATAGAGGGATGGTATCAGAGAAGGCTTACGGTAGCAGAGTGGGAGTCAT2080.12296923404355947No Hit
CATAGATGGGTCCCATTCTGTTTGCAATGGGTCCCAAAGTAGGCAATTCT2060.12178683756237142No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT1990.11764844987821317No Hit
CATAGACTTGTTGCCGAGACTGGAGTGCAATGGCGCGATCTCTGCTCACG1990.11764844987821317No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCCTCTTCACCTCCCAGATCT1930.11410126043464894No Hit
CATAGAACTGTCCCCTACTTTTCACCAGGGCTGCATGGTGACTTTTCTAT1920.11351006219405492No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG1900.11232766571286684No Hit
CATAGAGTTCCAGCAAAATGAAGGGGCGGTAGCGAGACTGGGTCCCAAAG1840.10878047626930262No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTTGGGTCCCAAAGTAGGCAAT1810.10700688154752051No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGCAGGGCTGCATGGTGACTTTTC1790.10582448506633244No Hit
CATAGATCCATGGTGTGCAAGGACAATGTGCACAGGACATTGGGGAATTC1750.10345969210395631No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA1700.10050370090098613No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)