FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806401

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806401
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences164297
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA73074.44743361108237No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG61893.766958617625398No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG56383.431590351619324No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG45392.762679781128079No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA43212.6299932439423728No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA41462.5234788218896265No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC38322.3323615160349855No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT38162.322623054590163No Hit
CATAGATCATGGGACTTCAGCATGGCTCACACCTATAATCCCATCTATGA35572.164981709952099No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA32982.007340365314035No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT32051.9507355581660044No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA31961.9452576736032914No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC28291.7218817142126759No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA27021.6445826764943974No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT24861.5131134469892937No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC21161.2879115260777738No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT20991.2775644107926498No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG20431.243479795735771No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG20061.220959603644619No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG19661.196613450032563No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC19021.157659604253273No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA17711.0779259511737889No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG13750.8368990304144324No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG11290.6871701857002868No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT10760.6549115321643122No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT10700.6512596091225038No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT10590.6445644168791883No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACAGTGAAACAAGATCGTGCC10150.6177836479059264No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGGCTCAC10080.6135230710238166No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACTACAAGTACCCACCAC9900.6025673018983912No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG9450.5751778790848281No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAACAGTGAAACAAGATCGTGC8930.5435278793891549No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA8520.5185730719367974No Hit
CATAGACTCTGTTTTGCTACCTGGGGATTTACTGACATGGGCAATTCGTC8400.5112692258531806No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG8380.5100519181725777No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC8220.5003134567277553No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC8210.4997048028874538No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT7600.4625769186290681No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCATAGAACAGCTAAAAATCT7240.4406653803782175No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT7010.4266663420512852No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT7000.4260576882109838No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACTGACGACATGGCT6870.41814518828706554No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTTTCCAGATCCTTGTCAACTC6810.4144932652452571No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACGGACTACAAGTACCCACCAC6440.39197307315410507No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT6400.3895384577928995No Hit
CATAGACTCTGTTTTGCTACCTGGGGCATAGAACAGCTAAAAATCTTGGA6300.3834519193898854No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT6020.366409611861446No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTAGGGTG6000.3651923041808432No Hit
CATAGAATACAACACACTCTCTGCCCTGTACACGGACTACAAGTACCCAC5960.3627576888196376No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC5910.35971441961813055No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA5840.35545384273602076No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA5840.35545384273602076No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATGAGACCAAGTCTCTGC5820.35423653505541797No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC5480.33354230448517014No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA5480.33354230448517014No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC5370.3268471122418547No Hit
CATAGAAGGAGCTGGACTGGATGGACACACTCCCTCATTATCCCTGTGCC5320.32380384304034765No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA5000.3043269201507027No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACATAGACCAAAGCTAGAAAC4780.29093653566407174No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA4610.2805894203789479No Hit
CATAGACGGGCCAGAGAATAGTGCTAGACACTGACGACAGTGAAACAAGA4570.27815480501774226No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCAGAGGACAGGTATCTATGAG4530.27572018965653666No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGGCTCACA4510.2745028819759338No Hit
CATAGAATACAACACACTCTCTGCCCTGCACTGACGACATGGCTCACACC4470.2720682666147282No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT4300.26172115132960433No Hit
CATAGAGAACAGCCCTGAGAGAATGCATGGTTCTACACATAGAGAACAGC4260.2592865359683987No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCACTGACGACATGGCTCACACC4250.2586778821280973No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGCTGAGAAAGGAGGATCACTCT4220.2568519206071931No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACACACTGACGACATGGCTCA4110.25015672836387765No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACGCAAACTAACACAGA4030.24528749764146637No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCTACACATAGAACAGCT3840.2337230746757397No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACGGACTACAAGTACCCAC3820.23250576699513684No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTGACGACATGGTTCTACACATAG3790.2306798054742326No Hit
CATAGATGGAAATTTTTGGCCAGGTGCAAATTGTCAGTGTGTCTATGAGA3790.2306798054742326No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACATAGACATGTGTGAGAGGG3720.2264192285921228No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA3670.22337595939061577No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA3610.21972403634880736No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA3590.21850672866820456No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG3570.2172894209876017No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC3530.2148548056263961No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCTACACATAGAGAACAGCTAAAA3520.21424615178609469No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACTCTATGAGACCAAGTCTC3490.21242019026519046No Hit
CATAGATGCTTCTGATATGTTGCCGTGATGCTCAGATCTCAAAAGGCTTC3470.21120288258458766No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT3430.20876826722338201No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCATAGATGCTCAGATCTCAA3420.20815961338308064No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTGTTCACTCTGATGGTACTTCT3420.20815961338308064No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGACACTTTGGACTCTGCC3420.20815961338308064No Hit
CATAGAGAACAGCCCTGAGAGAATGGTTCTACACATAGAGAACAGCTAAA3210.1953778827367511No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGGCTCACACCTATAATCCCATC3180.1935519212158469No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCATAGACATGTGTGAGAGGG3150.1917259596949427No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGTGTGAG3090.18807403665313427No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAAGAACAGC3080.18746538281283284No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACATGGCTCACAC3080.18746538281283284No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG3050.18563942129192865No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCTCCTCCTCCTCGAGGCAGAGGA2860.17407499832620194No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATTAGGGTGGGGAAAGAGAG2830.17224903680529774No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGACGACATGGTTCTACACA2820.1716403829649963No Hit
CATAGAGGATCCCCTGACATTTTGGTTGTACACATAGACCAAAGCTAGAA2760.1679884599231879No Hit
CATAGATGCCTCAAAGAGCTGAAGACACACTGACGACATGGCTCACACCT2730.16616249840228367No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGACAGCCGCTCACCTCTATGAGA2610.1588586523186668No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACACTGACGACATGGCTCACA2600.1582499984783654No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGCTCACACCT2570.15642403695746118No Hit
CATAGATGTGCCACATACCTTTCCCAGTTCTTTGGAGAGGAGGGGGCAGA2530.15398942159625556No Hit
CATAGAATACAACACACTCTCTGCCCTGGCTCACACCTATAATCCCATCT2480.15094615239474854No Hit
CATAGAGAACAGCCCTGAGAGAATGCTAGAGAACAGCTAAAAATCTTGGA2480.15094615239474854No Hit
CATAGATGATCCATCTACCTCTGCTTCACACTGACGACATGGCTCACACC2470.15033749855444714No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCACGGACTACAAGTACCCACC2450.14912019087384432No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACACGGACTACAAGT2440.14851153703354292No Hit
CATAGACTCTGTTTTGCTACCTAGGGTGGGGAAAGAGAGCACTCTATGAG2400.1460769216723373No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTCCTTGGAGAGAAATGCTG2370.14425096015143307No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCACTGACGACACGGACTACAAGT2310.14059903710962462No Hit
CATAGAAGGAGCTGGACTGGATGGACCACTGACGACATGGCTCACACCTA2300.13999038326932323No Hit
CATAGAAGGAGCTGGACTGGATGGACACTGACGACATGGCTCACACCTAT2270.13816442174841903No Hit
CATAGAATACAACACACTCTCTGCCCTGCGACATGGTTCTGCACATCTAC2260.13755576790811763No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC2160.13146922950510356No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG2150.13086057566480216No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACATGGCTCACACCTA2130.12964326798419934No Hit
CATAGATGATCCATCTACCTCTGCTTCACTGACGACATGGCTCACACCTA2130.12964326798419934No Hit
CATAGAAGTGACCCTCAGCTCAGTGACTCTCAGTTGTGTGTGTGGTCTAT2060.1253826911020895No Hit
CATAGAATACAACACACTCTCTGCCCTGCGACATGGCTCACACCTATAAT2060.1253826911020895No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACATCATGTCTATGAGAC2040.1241653834214867No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATCGTGCCTCTTGTAGAAGG2040.1241653834214867No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCGAGGCAGAGGACAGGTATCTATG1970.11990480653937687No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTAGGACA1970.11990480653937687No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACACTGACGACATGGCTCACACCT1950.11868749885877404No Hit
CATAGATCGGTAAGGAATTTGGCTCGAGGCAGAGGACAGGTATCTATGAG1880.11442692197666422No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACACTGACGACATGGCTCA1880.11442692197666422No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACACTGACGACATGGCTCAC1860.1132096142960614No Hit
CATAGACTCTGTTTTGCTACCTGGAGACAGCCGCTCACCTCTATGAGACC1840.11199230661545859No Hit
CATAGAGAACAGCCCTGAGAGAATGCCGACATGGTTCTACACATAGAGAA1700.10347115285123892No Hit
CATAGAGAACAGCCCTGAGAGAATGCCATGGTTCTACACATAGAGAACAG1660.10103653749003329No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT1660.10103653749003329No Hit
CATAGACTCTGTTTTGCTACCTGGGGCACACGCACAACTGGCATCTGGTG1650.10042788364973189No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)