FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806403

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806403
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101046
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1100010.88613106901807No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG65266.458444668764721No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG54735.416345030975991No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC45524.504878966015478No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG41694.125843675157849No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA39723.930882964194525No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA36423.604299032123983No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG33623.327197514003523No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA28452.815549353759674No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC25792.5523029115452367No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT20422.0208617857213547No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT19451.9248659026581953No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC16861.6685469983967698No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT12771.2637808522850977No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT12671.2538843694950814No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT12591.2459671832630683No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA12251.2123191417770125No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA12001.1875779348019713No Hit
CATAGACGGATTATTCTCTCCATGGTCTGAGGAGAATTCAAGCTGCTCTA10471.03616174811472No Hit
CATAGACCCAGATGCTGTCCCACTAACTATAAGCCATAGGACAATGAATC9030.8936523959384833No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG8400.83130455436138No Hit
CATAGATGTGTAGCCTGGGTCTGACAAGGGGTAAGGCGTACTGGTCTATG8330.8243770164083685No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG7940.7857807335273044No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA7610.7531223403202502No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA7200.7125467608811829No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA6420.6353541951190547No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG5740.568058112146943No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA5560.5502444431249134No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGTCATTGTCGCTGTCCCAT5510.5452962017299051No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG5280.5225342913128674No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG5260.5205549947548641No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGCTTCTTGTGGTAACTGGTC4970.4918551946638165No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGCTATACCACACTACA4730.46810363596777704No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTCAAGGGGTAAGGCGTACT4380.43346594620271955No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT4370.43247629792371794No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT4360.4314866496447163No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA4270.4225798151337015No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA4120.4077350909486768No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGATCATTGTTCACT4090.4047661461116719No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG3940.3899214219266473No Hit
CATAGAAATGATGCTGAAGGGCCTGCATGATGCTGAAGTGATGGGCTAGA3700.36616986323060785No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG3690.3651802149516062No Hit
CATAGATGGCCAAGATACGAGCACATCTGTTCAAGGGGTAAGGCGTACTG3690.3651802149516062No Hit
CATAGAAATGATGCTGAAGGGCCTGCATAGAAATGATGCTGAAGTGATGG3560.3523147873245848No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC3280.3246046355125389No Hit
CATAGAAAAAACAGTTGGCCAGGCATCCAAGGGGTAAGGCGTACTGGTCT3200.3166874492805257No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGTTCTACA3180.31470815272252245No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA3080.30481166993250597No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC3000.2968944837004928No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT2910.28798764918947806No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA2820.2790808146784633No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTGTTTCCCCACTCAAATACCA2770.2741325732834551No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG2710.2681946836094452No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG2560.25334995942442057No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGATCATTGTTCACTGC2510.24840171802941236No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGCCCTCTCTGCTGTTC2360.2335569938443877No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC2010.1989193040793302No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACCAGTGAAGCAGAGCTTCCCA2000.19792965580032856No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGCTCAGGTATGTCTTTATTAGCT1980.1959503592423253No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT1980.1959503592423253No Hit
CATAGAAGCCATGAACACAGGATTGAAAAAAGATTGATAGACTACAGGAA1920.19001246956831544No Hit
CATAGAAAAAACAGTTGGCCAGGCATACACTGACGATCATTGTTCACTGC1890.18704352473131047No Hit
CATAGACAGTGCCTTTGTGCGTGTTAACACCCACAGCCAGGAAAGAATCT1810.17912633849929735No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA1800.1781366902202957No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA1770.17516774538329077No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAACATAGAGTGTCTGTTTCCCC1650.16329196603527107No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAACACTGACGCTATACCACACT1650.16329196603527107No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT1600.15834372464026286No Hit
CATAGACCTCCGACAGTTTTTATGCACGTCAGGCTAATCTGAAATCTTCG1510.14943689012924805No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAGTTCTGCTTGTGGTGAGTTGAC1510.14943689012924805No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGTGTCCGCTATGTAGTTCAGG1480.14646794529224313No Hit
CATAGAGAAGACTCCCTCAACCCACCTAGGTGCAGAAGTAGGAAGTATTA1440.14250935217623656No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGGAGACAGCCGCTCACCTC1370.13558181422322507No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT1350.13360251766522177No Hit
CATAGAGTCCAACTATTCCAGCACCAATGATGCTGAAGTGATGGGCTAGA1330.1316232211072185No Hit
CATAGAGAAGACTCCCTCAACCCACCCTACACATAGAGATCCCACCATTT1330.1316232211072185No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT1300.12865427627021359No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCTCATCAGGAACCATG1300.12865427627021359No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCTATGAGACCAAGTCT1260.12469568315420701No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAATGATGCTGAAGTGATGGGC1250.12370603487520536No Hit
CATAGACCAACATTTCTTCTCCCAGGGTATAAAGCTGGACCCTCTCTGGG1230.12172673831720207No Hit
CATAGACATTTAATCCTCACAATGACCCATCACTGGCTCAGGTATGTCTT1200.11875779348019713No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATCTGAATGGTGGAAGGGTAAGAG1180.11677849692219384No Hit
CATAGACTCATTGCACTTTCCACAACTGTTCATTGCCTTCCCCACACCCT1160.11479920036419056No Hit
CATAGAAATGATGCTGAAGGGCCTGATGCTGAAGTGATGGGCTAGATCTA1020.10094412445816757No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)