FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806407

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806407
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99191
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1745317.59534635198758No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA39754.007420028026736No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG34103.437811898256898No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG28852.908530007762801No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA27652.7875512899355788No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA23442.3631176215584073No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT21962.213910536238167No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT20482.064703450917926No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG18871.9023903378330695No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA18071.8217378592815878No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA11111.120061295883699No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG11071.1160286719561252No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT10941.1029226441915092No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA10211.0293272575132824No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT10161.0242864776038147No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC9240.9315361272696112No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC9220.9295198153058241No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA8980.9053240717403797No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA8840.8912098879938704No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT7500.7561169864201389No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT7270.732929398836588No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAGAACAGCTAAAAATCTTGGAGC7150.7208315270538658No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT7140.7198233710719723No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG6980.703692875361676No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC6660.6714318839410833No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA6510.6563095442126806No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA6490.6542932322488936No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT5960.600860965208537No Hit
CATAGATGCTTCTGATATGTTGCCGTATGATGCTCAGATCTCAAAAGGCT5890.5938038733352824No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA5820.5867467814620277No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA5730.5776733776249862No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA5010.5050861469286528No Hit
CATAGACGGGCCAGAGAATAGTGCTAGAACAGCTAAAAATCTTGGAGCTC5000.5040779909467593No Hit
CATAGATGTGGTCTCAGTGCCCTATGACAGTGAAACAAGATCGTGCCTCT4410.4445967880150417No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCACATAGACCAAAGCTAGAAA4400.4435886320331482No Hit
CATAGAAGGAGCTGGACTGGATGGACTCACATGTGTGAGAGGGAAGGACT4340.43753969614178706No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG4270.4304826042685324No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA4100.4133439525763426No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT4010.40427054873930096No Hit
CATAGAACATCTACAGAACTCTCTACCCACCACTCTCAGTTGTGTGTGTG4000.4032623927574074No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG3770.3800748051738565No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGAACAGCTAAAAATCTTGGAG3580.36091984151787965No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA3550.3578953735721991No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTAGGGTGGGGAAAGAGAGC3550.3578953735721991No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA3460.34882196973515744No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGACGACATGTGTGAGAGGGAAG3320.3347077859886482No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT3260.328658850097287No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC3150.31756913429645833No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC3120.31454466635077777No Hit
CATAGATGCTTCTGATATGTTGCCGTACCGTACCATAGATGCTCAGATCT3070.3095038864413102No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT3000.30244679456805557No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA2970.299422326622375No Hit
CATAGAAGGAGCTGGACTGGATGGACACACTGACGACATGGTTCTACACA2910.29337339073101387No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGCACATAGACCAAAGCTAGAA2600.2621205552923148No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGACATGGTTCTACACATAG2340.23590849976308334No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA2260.2278432519079352No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCCTTGGAGAGAAATGCTGCTCTA2200.2217943160165741No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2190.22078616003468055No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT2150.2167535361071065No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGGATGCTC2150.2167535361071065No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCAAGGGGGTCTATGAGACCAA2080.20969644423385184No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2040.20566382030627778No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCATAGAACAGCTAAAAATCTTGGA2020.20364750834249074No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC2020.20364750834249074No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1960.19759857245112963No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGATGCAGCAACAAA1890.190541480577875No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGACTCTATGAGACATGTGTGAGAG1870.18852516861408797No Hit
CATAGAATACAACACACTCTCTGCCCTGGTGGAGGGCTTTGCTGTTTCTA1860.18751701263219445No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTGATTTACTGACATGGGCAATT1840.18550070066840743No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG1810.18247623272272687No Hit
CATAGAACATCTACAGAACTCTCTACCCATAGAACATTAGCTTAGTTAAT1770.17844360879515278No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCATAGGCCTGTTCACTCTG1660.1673538929943241No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACGCAAACTAACACAGA1660.1673538929943241No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1630.1643294250486435No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTGGTTCTACAATAGAACA1620.16332126906675No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTACGGTAGCACAACTGGCATC1580.15928864513917596No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACATGTGTGAGAGGGAAGGACT1540.15525602121160187No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATCTACACATAGAACAG1510.1522315532659213No Hit
CATAGACCTGTGTGTGAGGCATTGTTGTCAGTGTAGGGTGGGGAAAGAGA1510.1522315532659213No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACAGAATTTGCAAATACAGAAT1490.15021524130213426No Hit
CATAGAATACAACACACTCTCTGCCCTGTACACGGACTACAAGTACCCAC1490.15021524130213426No Hit
CATAGATGTGCCACATACCTTTCCCATACACATAGAACAGCTAAAAATCT1490.15021524130213426No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1480.14920708532024074No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGGCAAACTAACACAGAAACAGA1440.14517446139266668No Hit
CATAGATGCTTCTGATATGTTGCCGTATGTTGCCTTTCCTCAGTTCTTTT1430.14416630541077313No Hit
CATAGATGTGCCACATACCTTTCCCAACACTGACGACAGTGAAACAAGAT1420.14315814942887964No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTATGAGACCATGCCTCTTGTAG1400.1411418374650926No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1390.14013368148319907No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACGGACTACAAGTACCCACCAC1370.13811736951941206No Hit
CATAGACTCTGTTTTGCTACCTGGGGCATAGAGGCACAGGGTAATGGAGG1360.1371092135375185No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1290.1300521216642639No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG1280.12904396568237037No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGACACTTTGGACTCTGCC1240.1250113417547963No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCGTTATCCTCAGCAAA1220.12299502979100926No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA1220.12299502979100926No Hit
CATAGAGAACAGCCCTGAGAGAATGCCCTACACATAGAGAACAGCTAAAA1210.12198687380911574No Hit
CATAGAAGGAGCTGGACTGGATGGAGACAGCCGCTCACCTCTATGAGACC1180.11896240586343519No Hit
CATAGATCATGGGACTTCAGCATGGCACAACTGGCATCTGGTGATCTATG1160.11694609389964815No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGTGTGAGAGGGAAGGACTCTAT1160.11694609389964815No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT1160.11694609389964815No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC1150.11593793791775464No Hit
CATAGACTCTGTTTTGCTACCTGGGGTACGGTAGCACAACTGGCATCTGG1140.11492978193586112No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACAAGGACACTTTGGAC1110.11190531399018057No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGACGACATGGTTCTAC1090.10988900202639353No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGAGACCAA1060.10686453408071298No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC1060.10686453408071298No Hit
CATAGAATACAACACACTCTCTGCCCTGTACACTGACGACACGGACTACA1050.10585637809881945No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACACTTTGGACTCTGCCT1050.10585637809881945No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTCAGCAAA1050.10585637809881945No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCAGGGAAGCCCACACTTAGAAATG1030.10384006613503242No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG1020.10283191015313889No Hit
CATAGAATACAACACACTCTCTGCCCTGCACGGACTACAAGTACCCACCA1010.10182375417124537No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)