FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806409

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806409
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences179526
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC96625.3819502467609155No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA82604.601004868375611No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA73914.116952419148202No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC65833.666878335171507No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA64243.578311776567183No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA60803.3866960774483914No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT52152.904871717745619No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA51062.844156278199258No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA38852.1640319508037833No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG28691.59809721154596No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT27431.5279123915198913No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA23231.2939629914329958No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT22431.2494012009402538No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA22091.2304624399808384No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC21821.215422835689538No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA20671.1513652618562213No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT19831.1045753818388424No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC19441.0828515089736306No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG17620.9814734356026426No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT16400.9135167051012109No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG15880.8845515412809287No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA15710.875082160801221No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA15690.8739681160389025No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT15120.8422178403128238No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC14980.8344195269765939No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT13970.7781602664795072No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG13900.7742611098113922No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT13840.7709189755244367No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT12970.7224580283635796No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC11890.662299611198378No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA11730.6533872530998295No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG10840.6038122611766541No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC10830.6032552387954948No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT10710.5965709702215836No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT10660.5937858583157871No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA10130.5642636721143455No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG10030.5586934483027528No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATTGGTGAAAAGTAGGGGACAGT9130.508561433998418No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA8850.4929648073259583No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT8670.4829384044650914No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT8600.47903924779697643No Hit
CATAGATTTGGCACTCACATACACGCCGACATGGTTCCAACTCTATAGAT8080.45007408397669424No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT7990.4450608825462607No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGCTCTCTTCCGCCTTTATC7700.4289072334926417No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC7640.4255650992056861No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT7420.413310606820182No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG7340.40885442777090786No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGACAACTGGTGGTGCTGGAACT6730.37487606252019207No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT6590.3670777491839622No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG6330.35259516727382106No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGACCTTTTAGCTATTAAGA6020.33532747345788355No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTCTGGTGGTGCTGGAACTA5950.3314283167897686No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA5750.3202878691665831No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA5600.31193253344919397No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT5550.3091474215433976No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA5370.29912101868253066No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG5310.29577888439557504No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT5100.28408141439123025No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA4990.2779541681984782No Hit
CATAGACCCCCATGCAACCACATCTATAGCCTTCTCTGATACCATCCCTC4830.26904181009992983No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT4790.2668137205752927No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAAAATGTCAGTGGGCCAT4760.26514265343181487No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA4670.26012945200138143No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT4660.25957242962022214No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT4540.25288816104631084No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA4460.24843198199703664No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA4420.24620389247239954No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA4410.24564687009124025No Hit
CATAGAGACCCCCAAGTAGCCTAACTGACCCCCAAGTATATGACACATTA4400.24508984771008097No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT4350.2423047358042846No Hit
CATAGACCCACTTACACACACAGGTTTCCTTCTCTATGAGACCAAGTCTC4350.2423047358042846No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA4080.2272651315129842No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA4070.22670810913182493No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA4040.22503704198834712No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCATAATCTGGGAGGAACAGGGAG3670.20442721388545393No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCACATAGAATTGCAAACAGAAT3560.1982999676927019No Hit
CATAGAGTCATTCCAAACTGTGCACTTAGGAGTTCTGGCCCCTGTCTATG3510.1955148557869055No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTGTCATAAAACAATGGGCACAC3500.19495783340574624No Hit
CATAGACAGTCCTGCCGTGTACATGTACCCCCAAGTATATGACACATTAC3430.19105867673763133No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGAACAAGGGCATGGTCAAGTG3420.19050165435647204No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA3380.18827356483183494No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC3310.18437440816372003No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC3250.18103227387676438No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA3100.17267693815937524No Hit
CATAGATCATGGGACTTCAGCATGGCTCTCTTCCGCCTTTATCCTTCTAT3010.16766373672894178No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT2940.16376458006082684No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG2860.15930840101155266No Hit
CATAGACCCCCATGCAACCACATCTATGGCTGACATCCCAACCACACGTC2860.15930840101155266No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACTTAGGAGTTCTGGCCC2830.15763733386807482No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC2820.15708031148691554No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA2760.1537381771999599No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG2760.1537381771999599No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC2640.1470539086260486No Hit
CATAGATTTGGCACTCACATACACGCCACTGACGACATGGTTCCAACTCT2600.14482581910141148No Hit
CATAGACAGAACACCACACCCCTGTCGACGCTGACATCCCAACCACACGT2580.14371177433909293No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGAAAAGTAGGGGACAGTTCTAT2500.13925559528981873No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC2450.13647048338402237No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT2430.13535643862170382No Hit
CATAGAAAAGTCACCATGCAGCCCTGTAGATGGCCCACAGCCCAGTTTTC2420.13479941624054453No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTGAACAAGGGCATGGTCA2370.13201430433474817No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGCTACCGTACTTAGGAGTTCTG2310.12867217004779252No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA2280.12700110290431468No Hit
CATAGAACTTGTGCTTTTGGTGTCACTCAAATATAGACCTCAACCTCTAT2230.12421599099851832No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTGTGATTGTCCTGGTCTATGA2210.12310194623619977No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATCCCCTTTACCTACCTTCTC2170.12087385671156269No Hit
CATAGACAGTCCTGCCGTGTACATGTACACTGACGACATGGTGAAAAGTA2170.12087385671156269No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTAGCCTTCTCTGATACCA2150.11975981194924411No Hit
CATAGATCATGGGACTTCAGCATGGCCATGGTTCTACACATAGACAGTCC2100.11697470004344773No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC2080.1158606552811292No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTTGGTGAAAAGTAGGGGA2070.11530363289996994No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA2070.11530363289996994No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATTGTCCTTGCACACCATGG1970.10973340908837718No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTAAGGTTTTCCGGCTTGAG1940.10806234194489935No Hit
CATAGACAGAACACCACACCCCTGTCTACACATAGACAGAACACCACAGC1920.10694829718258081No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCCCTCTCCCCAAAATTCTGCT1910.10639127480142152No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG1890.10527723003910297No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC1820.10137807337098806No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTCTTAGGAGT1810.10082105098982877No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)