FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806412

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806412
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65957
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA755711.457464711857726No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA60249.133223160543992No Hit
CATAGATATGCCCATGGTTAGGAAGGAAGGATCAATATTGTTAAAATGGG58998.943705747684097No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCGCCAC23163.511378625468108No Hit
CATAGATGACTTGGGGGAAAATGGTAGAAACAGCCAGTTTTCCCTTCTAT19422.9443425261913063No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGAAAG13782.089239959367467No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTTGTATATCT7891.1962339099716481No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGGTTAAACAATATCCAAATCC7571.1477174522795155No Hit
CATAGATGGAGAGAGTGAGGGAAAGGAAATTATGGGAGCCCTGTGAAACG7091.0749427657413162No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGGTCAGGAGATTGAGACCATCCTG6791.029458586654942No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTCTACT5850.886941492184302No Hit
CATAGAATAGCCAGCAGAAGGAAGCAACCCAAATGGACATTTCACTTATA5580.8460057310065648No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG5530.8384250344921691No Hit
CATAGACCCTGGATTAGCATGAGGAACATGGCTTCCCATTTCAGACAAGG4960.7520050942280577No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA4910.744424397713662No Hit
CATAGAAGTTCTGATCCACATTCACGTATGTGTATAAATTATTTTGGTGC4870.7383598405021454No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA4610.6989402186272874No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA4390.6655851539639462No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT4280.6489076216322756No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT4190.6352623679063633No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTCAAAGATCA3750.5685522385796807No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCTGCCAC3720.5640038206710433No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA3600.5458101490364934No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCTGCTAT3310.5018421092529981No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCACCAC3280.4972936913443607No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAATTTGTTAAAAGAGG2940.4457449550464697No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA2790.4230028655032824No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTGCCAC2770.41997058689752415No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGTTTTTCTCAGGTTTGTCAAA2360.35780887547947904No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGCGCATGCTTG2310.35022817896508335No Hit
CATAGAAAGAGACAGAAGAGAAGGTCATTTAAAAAGGAAACAGAGATTGG2210.33506678593629186No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCAC2070.31384083569598376No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG2010.30474399987870887No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCAC1780.2698727959124884No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT1780.2698727959124884No Hit
CATAGACATGCTAACATTTCTGGGGATAGTTCAGAAAATTAGAGTACATT1550.23500159194626802No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGCACCAC1540.23348545264338885No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT1510.2289370347347514No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACGTGCCAC1490.22590475612899313No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCGCCAC1300.1970981093742893No Hit
CATAGATATGCCCATGGTTAGGAAGGTATGCCCATGGTTAGGAAGCCAGC1290.19558197007141015No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT1280.194065830768531No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCAACATGGTG1260.1910335521627727No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCATGTGCCAC1220.18496899495125613No Hit
CATAGACATGCTAACATTTCTGGGGATAGAGACTTGGTCTCATAGACATG1210.18345285564837696No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCAC1200.18193671634549782No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCCGCCAC1180.17890443773973952No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAACCCCTTAAGAAAATTTAATTGT1150.17435601983110208No Hit
CATAGACCCTTACCAATAACACAATCAACACATATTTTACGTGTTACATA1150.17435601983110208No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGAAGTCAAATTGTCC1110.1682914626195855No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTGCGGGTCTGTGCCAC1080.16374304471094803No Hit
CATAGACCTCCTGTTTGACCATTTTGACTGTTATTACAAAATAATGTTAA1070.1622269054080689No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGGGCCTGCCAC1070.1622269054080689No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCTGCCAC1060.16071076610518975No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGACAACAGGCGCCTGCCAT1060.16071076610518975No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG1040.15767848749943145No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCAC1030.1561623481965523No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGTGTGCCAC1010.153130069590794No Hit
CATAGAGGTGAGCGGCTGTCTCCACTAAAAATACAAAAATTAGCCAGGCA990.1500977909850357No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA960.14554937307639826No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCGCCAC930.14100095516776082No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCACACCAC920.13948481586488168No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTATGTCTTTATTAGCAGCGTGAGAA890.1349363979562442No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTATAGGTACTAATTTT890.1349363979562442No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTATGCACCAC880.13342025865336507No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGTTGGGACTACAGGCACATGCCAC880.13342025865336507No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACATCCACCACCACA870.13190411935048593No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCGTGCTAT860.13038798004760677No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGCGATTACAGGCGCCTGCCAC850.12887184074472763No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCACCAC840.12735570144184846No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGTCTGCCAC840.12735570144184846No Hit
CATAGACTGCCTCAGCCTCCTGAGTATCTGGGATTACAGGCGTGTGCCAC820.12432342283609017No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTCAAAGATGA810.12280728353321103No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACTCACTAC800.12129114423033188No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCGCCAC790.11977500492745274No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTCTGTCAAAGATCA790.11977500492745274No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACCACAAGTGTGCCACAC780.11825886562457359No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACTGGCATGCACCAC780.11825886562457359No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTATAGGCGCACACCAC770.11674272632169443No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA760.11522658701881529No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCATGCCAC760.11522658701881529No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCACGCCAC760.11522658701881529No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT740.112194308413057No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACTTACCAC730.11067816911017785No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGTGTGCACCAC720.10916202980729871No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCTGCCAC720.10916202980729871No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGATTATAGGTGCACGCCACC720.10916202980729871No Hit
CATAGACATGCTAACATTTCTGGGGATAACATTACTGGGGACTGTGACTC710.10764589050441954No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCAC700.10612975120154039No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTGAAAGATCA670.10158133329290296No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)