FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806419

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806419
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73367
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3246444.24877669797048No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG35914.894571128709092No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG18262.488857388199054No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT14411.9640983003257597No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA11811.6097155396840541No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT11771.604263497212643No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG9011.2280725666852945No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAACAATACAAAAAT8461.1531069827033953No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA7891.0754153774857906No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC7571.0317990377145039No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT7020.9568334537326046No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATGAGGTCAAGGTGGGAGGAT4520.6160807992694264No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT4190.5711014488802868No Hit
CATAGAACTGTTTAAGAGAAGTCAGCGAACACTGACGACATGGTTCCATG4160.5670124170267287No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT3810.5193070454018837No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG3610.49204683304482943No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT3170.43207436585931003No Hit
CATAGAGCATTACCCTCAAACTATCCCTACCGTATGGTATATTTTCTAAA3070.4184442596807829No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC2600.3543827606417054No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG2520.3434786756988837No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC2510.342115665081031No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTTGGAGGATGATCAATGC2340.3189444845775349No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT2300.313492442106124No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT2300.313492442106124No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT2170.29577330407403873No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG2160.294410293456186No Hit
CATAGAGCTATCTGGCAAAAACCCATCTACACTGCCAGCAAGGGAACAAA2080.28350620851336433No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTTCTATGGAGGATGATCA2060.28078018727765885No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1930.2630610492455736No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA1890.25760900677416276No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT1820.24806793244919376No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC1820.24806793244919376No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1700.2317118050349612No Hit
CATAGACACATGTAGGATGGGGTGGCTTATAAACAACAAGAATTTATTTC1640.22353374132784493No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1620.2208077200921395No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTACATGAGGTCAAGGTGGGAGG1530.2085406245314651No Hit
CATAGACACATGTAGGATGGGGTGGCACGCATCACACACACAGCACAGTG1520.20717761391361242No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1430.19491051835293796No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT1390.18945847588152712No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTATGCAGATTTGGACCTGCG1390.18945847588152712No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1360.18536944402796898No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1350.18400643341011627No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT1330.18128041217441085No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTATAAAAAATATGCAAAATTA1310.1785543909387054No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT1310.1785543909387054No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA1290.175828369703No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG1290.175828369703No Hit
CATAGACTTCAGCCCTCACAAGCCTTCAAATAAAAAAGATTTAAAATCCA1290.175828369703No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC1240.16901331661373642No Hit
CATAGAAAGTCTGGACCAAGTGCCTCACTCTCCTGCTCCTGCTTTTGCCA1220.166287295378031No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCCAGCACTTT1150.156746221053062No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATACAAAAATTAT1150.156746221053062No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1150.156746221053062No Hit
CATAGAGGTGTCCTTTCCCCACTTTAGCTGGGCACTACTCATTCCTGCCA1130.1540201998173566No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAATATACAAAAATTAG1050.14311611487453488No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA1040.14175310425668217No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1040.14175310425668217No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1000.1363010617852713No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG970.13221202993171316No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA960.13084901931386045No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA960.13084901931386045No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG950.12948600869600774No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG950.12948600869600774No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT940.12812299807815503No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG920.1253969768424496No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC890.12130794498889147No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGTCAAATA840.1144928918996279No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG830.11312988128177519No Hit
CATAGACTGGTCTCGAACTCCCAACCTCAGGGTGATCTGCCCACCTTTGC810.11040386004606975No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT770.1049518175746589No Hit
CATAGACACATGTAGGATGGGGTGGTATATTTTCTAAAGCCTGGGATCTA770.1049518175746589No Hit
CATAGACACATGTAGGATGGGGTGGCACCAACCTGATGCCAGTAGGATCA740.10086278572110077No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)