FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806423

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806423
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36518
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1473540.349964401117255No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA14714.028150501122734No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT8712.3851251437647187No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC8312.2755901199408513No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT6671.8264965222629936No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC5471.4978914507913905No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC4621.2651295251656718No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT4031.1035653650254669No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA3500.9584314584588423No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG2960.8105591762966208No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG2960.8105591762966208No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT2840.7776986691494605No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA2790.7640067911714771No Hit
CATAGACTTGATGCCCAGGAAACCTCTCTATGAGACACTTCAGTTGACTA2730.7475765375978969No Hit
CATAGACTTGATGCCCAGGAAACCTCATGGTGTTACTTAAAGACTTGAGA2390.6544717673476094No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG2380.6517333917520127No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTAGGACTTCAGTTGACTATAA2320.6353031381784325No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA2190.5997042554356756No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA2170.5942275042444821No Hit
CATAGAGAAGAGAAGGCGACAATGGCTCACACCGGTAATTCCAGCTACTT1870.5120762363765814No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT1820.49838435839859796No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC1730.4737389780382277No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC1510.4134947149351005No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT1510.4134947149351005No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT1210.33134344706719976No Hit
CATAGAGGGTGTTTTTCGGTGTCACACAGAATTAGATCTAGCTCTATGAG1170.32038994468481297No Hit
CATAGACCTTCCTGTTGGCCACACAGGACCAGGAGGTCACACAGGACCAT1150.3149131934936196No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT1140.31217481789802287No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC1090.29848293992003944No Hit
CATAGACAGCTCACAGACTGCATACTGAGGAATTCTTGCCAGGGATCTAT1070.29300618872884604No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG1050.2875294375376527No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGGGACATGGATGAAGC1030.28205268634645925No Hit
CATAGAGCTATCAGTATACTCCCACCATGAAATACTATGCAGCCATAAAA1030.28205268634645925No Hit
CATAGAACAATGTAATAAGCATCGGAGGACACTGACGACATGGTTCTACA1020.2793143107508626No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1000.2738375595596692No Hit
CATAGAGAAGAGAAGGCGACAATGGCACAGACACATCATGGAATACTATG970.2656224327728791No Hit
CATAGAACAAGGCCAGAATTACCCTGTGCTCATACAGAATTAGATCTAGC970.2656224327728791No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT960.2628840571772824No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC930.2546689303904924No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC910.24919217919929898No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC900.24645380360370228No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG810.22180842324333203No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGGGTG810.22180842324333203No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT810.22180842324333203No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTGGGTGCCTG760.20811654526534862No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCAAGATTTATTGTGAAGAGTAAAA750.2053781696697519No Hit
CATAGAGAAGAGAAGGCGACAATGGCGTGAACCTGGGAGGCGGAGCTTGC740.2026397940741552No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG730.19990141847855852No Hit
CATAGACTTGATGCCCAGGAAACCTCATGGTGTTATTTAAAGACTTGAGA710.19442466728736513No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACTCTTCACTATGTCA700.19168629169176846No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG670.18347116490497836No Hit
CATAGACAGCTGACCAGAAAATGTTTCACATATACACCATGGAATACTAC660.1807327893093817No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTTCTAC660.1807327893093817No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG620.1697792869269949No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT620.1697792869269949No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG610.16704091133139823No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG610.16704091133139823No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCGGGGCTGGTTGGGCGCAAGTG560.15334903335341477No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG550.15061065775781807No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC540.14787228216222137No Hit
CATAGAGAAGAGAAGGCGACAATGGCTTGAACCCGGGAGGTGGAGGCTGC520.142395530971028No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACCGTAGGGTGGTCTTACTCT520.142395530971028No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG520.142395530971028No Hit
CATAGACAGGAGGAGGAAGAAGAGGATAAAACAGGATTAGAGTTAAAAAG510.1396571553754313No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT510.1396571553754313No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC500.1369187797798346No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG480.1314420285886412No Hit
CATAGACCCTTAGAGTTTCAGCCTCCCTCTCAGACATGTTTCCTAGTTTC470.12870365299304454No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT470.12870365299304454No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT460.12596527739744784No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC450.12322690180185114No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACTGACGACATGGTTCTACAC450.12322690180185114No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTTCTACACA440.12048852620625446No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG440.12048852620625446No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACATATACACCATGGAATACT430.11775015061065774No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG420.11501177501506106No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGCTCATACAGAATTAGATC420.11501177501506106No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGACCTATGAGA410.11227339941946438No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTGACGACATGGTTCTAC410.11227339941946438No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGTGAGAAATGATGATGGC400.10953502382386768No Hit
CATAGACCCTTAGAGTTTCAGCCTCCTTAATCCTCTGTTACAAGCCAAGA390.106796648228271No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGATCTGCG390.106796648228271No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC380.10405827263267431No Hit
CATAGAGAAGAGAAGGCGACAATGGCTTGAACCTGGGAGGCAGAGGTTGC380.10405827263267431No Hit
CATAGACCTTCCTGTTGGCCACACAGGTATACTTGAGTCTGTACTGAAAG380.10405827263267431No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGTTCTACACATAGAACCCAAAGAG370.1013198970370776No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG370.1013198970370776No Hit
TAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGAG370.1013198970370776No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG370.1013198970370776No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)