FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806424

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806424
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36518
Sequences flagged as poor quality0
Sequence length150
%GC47

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1377037.70743195136645No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT14563.9870748671887837No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG14203.8884933457473028No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG7291.9962758091899884No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG6601.8073278930938168No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT6281.7196998740347227No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA5601.5334903335341477No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT3881.0624897310915165No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3550.9721233364368257No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT3300.9036639465469084No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG3240.8872336929733281No Hit
CATAGATAGCAGCAATCTCAGGCCTCCAAACTTGGACTGAAATCTGTACC3120.854373185826168No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG2950.8078208007010241No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT2870.7859137959362507No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGTCTCATAGAGAGGTTTCC2470.676378772112383No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG2220.6079193822224657No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCTAGAAGCTTTGAGATTT2190.5997042554356756No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT2100.5750588750753054No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA2030.5558902459061285No Hit
CATAGATAGCAGCAATCTCAGGCCTCAGGCGATCCTCTCACCTCAGCCTC1840.5038611095897914No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT1790.49016923161180787No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA1610.4408784708910674No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG1570.42992496850868067No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT1430.391587710170327No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA1400.3833725833835369No Hit
CATAGATCCAGCTTCATCCATGTCCCTACAAAGGACATGAACTCATCCTT1270.3477737006407799No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA1140.31217481789802287No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGTGCAGAGCCTTCAGGTCA1070.29300618872884604No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC1050.2875294375376527No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAACCTGTGTATATTCTCCT1030.28205268634645925No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC1010.2765759351552659No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGGTAATTCTGGCCTTGT950.2601456815816858No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTATGCAGTCTGTGAGCTGTCTAT950.2601456815816858No Hit
CATAGATCCAGCTTCATCCATGTCCCTGCAGAGGACATGAACTCATCATT950.2601456815816858No Hit
CATAGACACAACGTTTGAGACTGCCTTGTGATCCTGTGCACGGTCCTGCA940.2574073059860891No Hit
CATAGATCCAGCTTCATCCATGTCCCTGCAAAGGACATGAACTCATCCTT890.24371542800810558No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT880.2409770524125089No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATGGTCTCATAGAGCTAGA860.2355003012213155No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA840.23002355003012212No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC840.23002355003012212No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT830.22728517443452545No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC820.22454679883892875No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG820.22454679883892875No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG820.22454679883892875No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA810.22180842324333203No Hit
CATAGACTCACTCTGTCACCCAAGCTAGCAGTGCAACCCCACCAGTCCCC790.21633167205213866No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAGGCAAGGGTAC750.2053781696697519No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA750.2053781696697519No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA740.2026397940741552No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA680.18620954050057506No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACGTGGTGTTTGGG660.1807327893093817No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCGTCAGTGTACGTGGTGTTT610.16704091133139823No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG570.15608740894901144No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT560.15334903335341477No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG540.14787228216222137No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG530.14513390656662467No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGCTGGAGTGCAGTAGTGTGATCT520.142395530971028No Hit
CATAGACGGGAAGAGTAAGACCACCCTACGGTGCCATACCAAGAATAAGA520.142395530971028No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA510.1396571553754313No Hit
CATAGATAGCAGCAATCTCAGGCCTCCCTTTCAGGTCCCAGACTCCCGGC510.1396571553754313No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA500.1369187797798346No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGTCTCCACAAGTCCGCGCAGAGC480.1314420285886412No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA480.1314420285886412No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA470.12870365299304454No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC460.12596527739744784No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGC450.12322690180185114No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC450.12322690180185114No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA440.12048852620625446No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA430.11775015061065774No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA430.11775015061065774No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGAGGGAGGCTGAAACTCTAA410.11227339941946438No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA400.10953502382386768No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC400.10953502382386768No Hit
TATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA400.10953502382386768No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTTGGTCTCATAGAGCTAGA390.106796648228271No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCTGGTCA390.106796648228271No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT380.10405827263267431No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA380.10405827263267431No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTATGTGTAGAACCATGTCGTCAG380.10405827263267431No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCACGATCTCTGT380.10405827263267431No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA370.1013198970370776No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGTTGCAATCTTCAC370.1013198970370776No Hit
CATAGATAGCAGCAATCTCAGGCCTCTAGAGGTAAACAAACTTCTGGCCC370.1013198970370776No Hit
CATAGATCCCTGGCAAGAATTCCCCAATATGAACAGAAAGAAGCTCTATG370.1013198970370776No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)