FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806425

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806425
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences115407
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4463538.67616349094942No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG55764.831596003708614No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG42083.646225965496027No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA34602.9980850381692616No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC29702.573500740856274No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG22571.9556872633375793No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC22111.915828329304115No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA15161.313611825972428No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC14671.2711533962411292No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA14481.2546899234881768No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG13391.1602415798001855No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA12791.108251665843493No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC12321.067526233244084No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAACACTGACGACATGGTTC11741.0172693164192814No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG11060.95834741393503No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAACCACTTGAACATTGCCTT7710.6680703943434974No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT7710.6680703943434974No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA7140.6186799760846396No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA6580.5701560563917266No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA6140.5320301194901522No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT5870.5086346582096407No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG5280.45751124281889316No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAATGGCATTAAATGACTTGCCCAA5120.44364726576377517No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC4950.4289167901427123No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA4590.3977228417686969No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC3790.328402956493107No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAGCATGTTGAGATGAATAAT3750.32493696222932755No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA3710.32147096796554797No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT3660.31713847513582366No Hit
CATAGAAGATGGTCTGCTACACTGGTAGACACCTTGTATATGCCATGTCT3480.30154150094881593No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT3390.2937430138553121No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA3130.27121405114074537No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGTGCAGCTATATTGGAGGAA2920.253017581255903No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC2880.24955158699212351No Hit
CATAGAAGATGGTCTGCTACACTGGTGGTTCCACACTCATGCAAAGCTGG2700.23395461280511584No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGCTAGTCCGTCACCCCTAATC2690.23308811423917095No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTGGCTAGTCCGTCACCCCTAAT2580.22355663001377732No Hit
CATAGATGTGCCTCTCCAACATTCATCTCCACACTCATGCAAAGCTGGTC2510.21749114005216322No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2500.21662464148621835No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC2430.21055915152460425No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCATTCACCAAGTCACCCAGCC2370.205360160128935No Hit
CATAGAAGGAGGGGAAACTGAGGCCACACTGACGACATGGAGGGAAGGAA2320.20102766729921062No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG2290.19842817160137602No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGAGGGAAGGAAGGGCAAACTCT2210.191496183073817No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTCTCCAGAACCCACCATCTATGA2160.18716369024409266No Hit
CATAGATCATGGGACTTCAGCATGGCTAGTCCGTCACCCCTAATCTATGA2140.18543069311220292No Hit
CATAGAAGATGGTCTGCTACACTGGTATGGTTCCACACTCATGCAAAGCT2100.1819646988484234No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAATGGTTCTACACATAGAGTC2010.17416621175491953No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1980.17156671605708493No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1970.17070021749114006No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG1920.1663677246614157No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1890.16376822896358106No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAATAGTTTTTCCAAATATAAG1850.16030223469980157No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT1840.1594357361338567No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1790.15510324330413233No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT1770.15337024617224257No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT1760.1525037476062977No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1690.1464382576446836No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT1590.13777327198523487No Hit
CATAGAAGGAGGGGAAACTGAGGCCAACACTGACCTCATGATCTGCCTCA1590.13777327198523487No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACGCCGTGGCTCACACCTGTAAT1560.13517377628740024No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1550.13430727772145537No Hit
CATAGACCCTTCTCCATGCCACATCATGCAAAGCTGGTCTATGAGACCAA1480.12824178775984127No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1430.12390929493011689No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1420.12304279636417201No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCTTCTTATAGCCAGTGTCTCCCC1380.11957680210039252No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1350.11697730640255792No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGAGGGAAGGAAGGGCA1280.11091181644094379No Hit
CATAGATGTGCCTCTCCAACATTCATGCAAAGCTGGTCCACACTCATGCA1270.11004531787499891No Hit
CATAGAGCTTCTGATCACTTTCGCCCATGGGTCCTTTTCACATCATCTAT1190.10311332934743994No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT1180.10224683078149505No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)