FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806426

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806426
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences115407
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4515339.125009748108866No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG56664.909580874643652No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG45553.946900967878898No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT34462.9859540582460338No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC29212.531042311124975No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA27222.3586090965019455No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG22331.9348912977549024No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG21941.9010978536830523No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA15401.334407791555105No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG12221.0588612475846353No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACCAT12021.0415312762657378No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG10760.9323524569566838No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT7690.6663373972116077No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTGAGGTAAAACTATTAGCGAGAC7360.6377429445354268No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA6970.6039495004635768No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT6590.5710225549576715No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC5790.5017026696820817No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT5650.48957168975885346No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG5220.45231225142322395No Hit
CATAGATGACCTGTTAATCTGCCCCCAGATCACAGAGTGGCCTTGGGCAA5150.4462467614616098No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC4910.42545079587893286No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA4800.4159193116535392No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC4490.38905785610924815No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTTTGAGGTAAAACTATTAG3720.32233746653149287No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA3690.3197379708336583No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG3680.3188714722677134No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA3650.31627197656987877No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT3510.30414099664665056No Hit
CATAGACCAAACACAGAAGACATGGCATATACAAGGTGTCTACCAGTGTA3430.29720900811909157No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG3360.2911435181574774No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA3100.26861455544291074No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG2920.253017581255903No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTACTTGGCCTCAGTTTCCCCT2840.24608559272834402No Hit
CATAGACCAGCTTTGCATGAGTGTGGAACCACCAGTGTAGCAGACCATCT2770.24002010276672991No Hit
CATAGATTAGGGGTGACGGACTAGCCACTTGGCCTCAGTTTCCCCTCCTT2610.22615612571161198No Hit
CATAGATTAGGGGTGACGGACTAGCCCTTGGCCTCAGTTTCCCCTCCTTC2580.22355663001377732No Hit
CATAGACCAGCTTTGCATGAGTGTGGAGATGAATGTTGGAGAGGCACATC2460.21315864722243885No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA2450.21229214865649396No Hit
CATAGAGGCTGGGTGACTTGGTGAATGACTTGGCCTCAGTTTCCCCTCCT2310.20016116873326573No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG2300.1992946701673209No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCATGTCGTCAGTGTGGCCTCAGTTT2290.19842817160137602No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2290.19842817160137602No Hit
CATAGATGGTGGGTTCTGGAGAGAGACACTGGGGGCACAAAGTTCTATGT2200.19062968450787215No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA2200.19062968450787215No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTA2160.18716369024409266No Hit
CATAGATTAGGGGTGACGGACTAGCCATGCTGAAGTCCCATGATCTATGT2150.18629719167814776No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA2100.1819646988484234No Hit
CATAGACCAGCTTTGCATGAGTGTGGAACCATACCAGTGTAGCAGACCAT2060.1784987045846439No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTTGAGGTAAAACT1990.1724332146230298No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTGGCCTCAGTTTCCCCTCCTTCT1920.1663677246614157No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1910.1655012260954708No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG1880.1629017303976362No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1810.1568362404360221No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1800.1559697418700772No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA1790.15510324330413233No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG1780.15423674473818746No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT1750.15163724904035283No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCAGCCTCCCAGATTGCTGGG1730.1499042519084631No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1680.1455717590787387No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTGAGGCAGATCATGAG1650.1429722633809041No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1570.1360402748533451No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1540.1334407791555105No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCCGCCTCCCAAAGTGCTGGG1520.13170778202362077No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1490.12910828632578614No Hit
CATAGACCAGCTTTGCATGATGTGGCATGGAGAAGGGTCTATGTGTAGAA1410.12217629779822715No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTATGTGTAGAACCATGTCGTC1390.1204433006663374No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1380.11957680210039252No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGAGACACTGGGGGCACAAAGT1350.11697730640255792No Hit
CATAGACCAGCTTTGCATGAGTGTGGACCAGCTTTGCATGAATGTTGGAG1290.11177831500688866No Hit
CATAGATGATGTGAAAAGGACCCATGGGCGAAAGTGATCAGAAGCTCTAT1210.10484632647932968No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAGAGACTTGGCCTCAGTTTCCCCT1200.1039798279133848No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTTGGAGAGGCACATCTATGTGTA1200.1039798279133848No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA1170.10138033221555019No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)