FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806427

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806427
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences230413
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA152976.63894832322829No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG125215.434155190896347No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG96044.1681675947103685No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG92754.025380512384284No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC89053.864799295178657No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA88733.850911189906819No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC84873.683385920065274No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG81213.5245407160186275No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG81183.5232387061493924No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT72033.1261256960327755No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG62692.7207666234110057No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA53702.330597665930308No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA47032.0411174716704354No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT46172.0037931887523706No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT45681.9825270275548688No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT39221.7021609023796398No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA36691.592358070074171No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC34481.4964433430405404No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA23831.0342298394621832No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT23291.0107936618159565No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG23241.008623645367232No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT21080.9148789347823257No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC20260.8792906650232409No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA19210.8337203196000226No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGGAGACAGCCGCTCACC12250.531654029937547No Hit
CATAGACCGCTTCCCAATTTTTGTAACATTGCTTCTTGTGGTAACTGGTC10970.47610160885019503No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT10060.43660730948340587No Hit
CATAGATGGCCAAGATACGAGCACATTGCTTCTTGTGGTAACTGGTCTAT10020.43487129632442617No Hit
CATAGAAAAAACAGTTGGCCAGGCATCAAGGGGTAAGGCGTACTGGTCTA9940.43139927000646666No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG9860.42792724368850715No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGGAGACAGCCGCTCACCTCTA9520.4131711318371793No Hit
CATAGATCATGGGACTTCAGCATGGCGGTTCTACAAAGGATTCTGGGCCA9120.39581100024738186No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT8100.35154266469339834No Hit
CATAGACACAACAGAGAGAACGGGCTACATTGCTTCTTGTGGTAACTGGT8090.35110866140365343No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC7990.34676862850620405No Hit
CATAGACCCAAGACCCCAGCCTTTACCGTACGCTATACCACACTACACAC7880.3419945923190098No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT7690.33374852981385594No Hit
CATAGACCAGCAGACACTCCCATCATTCAGACTCTTGGAGACAGCCGCTC7640.3315785133651313No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGCTTCTTGTGGTAACTGGTC7560.3281064870471718No Hit
CATAGAGTGCCTGTTTCCTCATTCGTTGGTCCCAACTGTCTCTGAAAAAT7440.3228984475702326No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT7430.32246444428048765No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAAGGGGTAAGGCGTACTGGTCT7220.31335037519584397No Hit
CATAGACGGATTATTCTCTCCATGGTCTATCATTGCTTCTTGTGGTAACT7050.30597231927018004No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGCCCTCTCTGCTGTTC7050.30597231927018004No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG7020.30467030940094525No Hit
CATAGACCTCCGACAGTTTTTATGCACAAGGGGTAAGGCGTACTGGTCTA6880.29859426334451616No Hit
CATAGATCATGGGACTTCAGCATGGCCACATAGAGTGTCTGTTTCCCCAC6780.2942542304470668No Hit
CATAGACACAACAGAGAGAACGGGCTCAAGGGGTAAGGCGTACTGGTCTA6740.292518217288087No Hit
CATAGAGTGTCTGTTTCCCCACTCAAATACCATCTATGAGACCAAGTCTC6610.28687617452140285No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCTGACGCTATACCACACTA6320.2742900791187997No Hit
CATAGATGTGTAGCCTGGGTCTGACAAATGAGAAACCTGGATGCTTCTAT6210.2695160429316054No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGCTATACCACACTACA6170.26778002977262566No Hit
CATAGACCTCCGACAGTTTTTATGCACACACTGACGCTATACCACACTAC6060.26300599358543136No Hit
CATAGAAATGATGCTGAAGGGCCTGCAATGATGCTGAAGTGATGGGCTAG6000.26040197384696173No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT5990.2599679705572168No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGCTATACCACACTACA5990.2599679705572168No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA5980.25953396726747185No Hit
CATAGATCATGGGACTTCAGCATGGCCACTGACGCTATACCACACTACAC5840.25345792121104277No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC5810.252155911341808No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGGAGACAGCCGCTCACCT5790.2512879047623181No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGTGCGATCATTGTTCACTGC5780.25085390147257314No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGTGTAACTTGGAGACAGCCG5550.2408718258084396No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT5460.2369657962007352No Hit
CATAGACCGCTTCCCAATTTTTGTAACACATTGCTTCTTGTGGTAACTGG5370.23305976659303076No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGTGGAGACAGCCGCTCACCT5360.23262576330328583No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACCAAGTCAAGGGGTAAGGCGT5300.23002174356481622No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA5260.2282857304058365No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGAGGAGCTGAGTCATGGGGT5080.2204736711904276No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGATGCTGAAGTGATGGGCTA5010.21743564816221309No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGGGTGGAAGGGTAAGAGAGGGT5000.21700164487246815No Hit
CATAGATCATGGGACTTCAGCATGGCCTTGGTCTCAGAGATCCCACCATT4910.2130956152647637No Hit
CATAGACGGATTATTCTCTCCATGGTCTACAAAGGATTCTGGGCCATCTA4870.21135960210578397No Hit
CATAGACGGATTATTCTCTCCATGGTCTGTTTCCCCACTCAAATACCATC4850.2104915955262941No Hit
CATAGAAGGACAAAGACATTTAGGACCCAGGGGTCTACCAGTTATTAGTT4820.2091895856570593No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG4660.20224553302114032No Hit
CATAGACCAGCAGACACTCCCATCATGGTTCTACACATAGAGATCCCACC4600.19964151328267069No Hit
CATAGACTCATTGCACTTTCCACAACTGTTCTTCCTTTTCTGCCTTCATC4050.17577133234669917No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGTGTAAGCAGCATAATTTCC3860.1675252698415454No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGAGACAGCCGCTCACCTCTATGA3790.16448724681333085No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG3770.16361924023384097No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTGGAGACAGCCGCTCACCTCTAT3610.15667518759792198No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGCCCTCTCTGCTGTTCC3580.1553731777286872No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG3570.15493917443894226No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCTACGATCATTGTTCACTGCA3570.15493917443894226No Hit
CATAGACATTTAATCCTCACAATGACCCATCATCAAGGAAGTTTCTGTGA3530.1532031612799625No Hit
CATAGACGTGACTAAAAGCATGTTGGTCTATGGGTGGAAGGGTAAGAGAG3510.15233515470047262No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGTGGAAGGGTAAGAGAGGGTC3470.1505991415414929No Hit
CATAGACCTCCGACAGTTTTTATGCACCGTGGTGGAAGGGTAAGAGAGGG3460.15016513825174793No Hit
CATAGACCAGCAGACACTCCCATCATGGAGACAGCCGCTCACCTCTATGA3410.14799512180302327No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCATGGCTCAGGTATGTCTTTAT3330.14452309548506379No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGAATACAGGCTAATCTGAAATC3330.14452309548506379No Hit
CATAGAGAAGACTCCCTCAACCCACCGTCTCAGAGATCCCACCATTTGCC3290.14278708232608403No Hit
CATAGACATTTAATCCTCACAATGACCCATTGCTTCTTGTGGTAACTGGT3280.1423530790363391No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGGAGACAGCCGCTCACCTC3210.13931505600812455No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGGGTGGAAGGGTAAGAGAGGG3120.13540902640042013No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG3070.13323900995169544No Hit
CATAGACATTTAATCCTCACAATGACCCATCTGGGCCCCAGTGTGAATAC3060.1328050066619505No Hit
CATAGACGGATTATTCTCTCCATGGTCTATGTGCAGAAGTAGGAAGTATT3000.13020098692348087No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTACAAATGAGAAACCTGGA2950.1280309704747562No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGGTGGAAGGGTAAGAGAG2800.12152092112858216No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGGAGACAGCCGCTCAC2770.12021891125934733No Hit
CATAGACACAACAGAGAGAACGGGCTAATCTGAAATCTTCGTGTTCTATG2700.11718088823113278No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT2630.11414286520291825No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT2620.1137088619131733No Hit
CATAGAACAGATGTTCTCCTTGTTTTCTATAACACACTGACGATCATTGT2610.11327485862342836No Hit
CATAGATGGCCAAGATACGAGCACATGACCAACATTTCTTCTCCCAAGTA2590.1124068520439385No Hit
CATAGAGCTTGGGTGCGAACATCAACAAGGTGGAAGGGTAAGAGAGGGTC2590.1124068520439385No Hit
CATAGACATTTAATCCTCACAATGACCCATGATACAAATGAGAAACCTGG2470.10719881256699924No Hit
CATAGATCATGGGACTTCAGCATGGCCACATCGAGTGTCTGTTTCCCCAC2460.10676480927725432No Hit
AAGGATTCTGGGCCATCTATGAGACCAAGTCTCTGCTACCGTAGTATCGT2420.10502879611827458No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCAGTGTGGAGACAGCCGC2400.10416078953878469No Hit
CATAGAGAAGACTCCCTCAACCCACCTCTTACCCTTCCCCACACCCTCTT2340.1015567698003151No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)