FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806440

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806440
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53866
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG577110.713622693350166No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA37106.887461478483645No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT35266.545873092488769No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGAGGCACTTGGTCCAGA30215.608361489622396No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT28615.311328110496417No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG27655.133108083020829No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAGGGATAG17713.2877882152006834No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA17223.1968217428433516No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT14522.6955779155682618No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA13532.5117885122340624No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT12512.3224297330412504No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTTGCTCTTTGACTTATGA11582.149779081424275No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTGCTCTTTGACTTATG11442.1237886607507517No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACTCCTAT10411.9325734229384026No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA9161.7005160954962313No Hit
CATAGAGTTTTGTTCCCTTGCTGGCACTTGGTCTCATAGAGTTTTGTTCC7601.4109085508484016No Hit
CATAGACTCAAGAAACTTACAATCATGGCAAGGCTTGTGAGGGCTGAAGT7381.3700664612185796No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAGCATTTTAACACAGCA6781.258678944046337No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAGTCTTTT6681.2401143578509635No Hit
CATAGACCATCCTCCCACCTTGACCTCTATGTGACTCCTATGTAATGTCT5360.9950618200720306No Hit
CATAGAAGGTGATAATCATGACAGCCAAGCATTTTAACACAGCATTGAAG5070.9412245201054468No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAAGGCTTGTGAGGGCTG4870.9040953477146995No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT4630.8595403408458026No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCCGGCCACATTATTTTCTATG4610.8558274236067278No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGCATTTTAACACAGCATTGAA3870.7184494857609623No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTAAGGCTTGTGAGGGC3830.7110236512828129No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT3800.7054542754242008No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATACGGTAGCAGAGTCTTTTG3250.6033490513496454No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT3180.5903538410128838No Hit
CATAGAAGCAGCATTGATCATCCTCCATGCTGAAGTCCCATGATCTATGT3140.5829280065347343No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC2850.5290907065681506No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG2460.45668882040619313No Hit
CATAGACCATCCTCCCACCTTGACCTATCCTCCCATCTCAAGTCTCACTC2280.4232725652545205No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG2090.38799985148331045No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACTTGGTCTCATAGAC1930.3582965135707125No Hit
CATAGAGATCAATCCCTGTCTACATAACCACCCCATCCTACATGTGTCTA1620.300746296365054No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGCCACCCCATCCTACATGTG1590.2951769205064419No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTGACACTCTTGGTCTTTG1540.28589462740875504No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCAGTACAGGAGCACCCTCTATGTG1450.2691864998329187No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGTCCTTTCCCCATCTCCAAC1350.250621913637545No Hit
CATAGACCATCTGCGCATCCTGTCTGGCTTCCCTGCTTGTCTTTCATCTA1340.24876545501800765No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG1340.24876545501800765No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGGACTGAGGCACTTGGTCC1260.2339137860617087No Hit
CATAGAGTTTTGTTCCCTTGCTGGCAGCAGAGACTTGGTCTCATAGAGTT1210.22463149296402182No Hit
CATAGAGAATACAATGAACTGTGATGGCACGGTAGCAGAGGCACTTGGTC1200.22277503434448448No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAAAGTGGGGAAAGGACA1190.22091857572494708No Hit
CATAGACTACCACTACCCAGCACAGGAGCCACCCCATCCTACATGTGTCT1190.22091857572494708No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCCATCCTACATGTGTCTA1080.20049753091003603No Hit
CATAGAGAATACAATGAACTGTGATGGCACTCTTGGTCTTTGTGGATCTA1050.1949281550514239No Hit
CATAGAGAATACAATGAACTGTGATGGCAGGCTTGTGAGGGCTGAAGTCT950.1763635688560502No Hit
CATAGAAGGTGATAATCATGACAGCCAACACTGACGCCATGCTGAAGTCC940.17450711023651283No Hit
CATAGACCGGGGGTAGATAGGTGGTTGGGAGTTCGAGACCAGTCTATGTG930.17265065161697546No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAGCATTTT890.16522481713882597No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG870.16151189989975123No Hit
CATAGAGAATACAATGAACTGTGATGGCACTTGGTCTCATAGAGAATACA860.15965544128021386No Hit
CATAGAACATCGCACACACATGGAACCATGTCGTCAGTGTACTCCTATGT820.15222960680206438No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTTTGACTTATGATGGAGTTCT740.1373779378457654No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGACTCCTATG720.1336650206066907No Hit
CATAGAGGGACGGAGGCAAGAGGATACGGAGGCACTTGGTCCAGACTTTC690.12809564474807858No Hit
CATAGATTGCACCTAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG680.1262391861285412No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTATGTGTAGAACCATGTCGTC660.12252626888946645No Hit
CATAGAAGCAGCATTGATCATCCTCCACCTTTCCCCATCTCCAACCCTCT660.12252626888946645No Hit
CATAGAGAATACAATGAACTGTGATGGCACTCTTGCTCTTTGACTTATGA630.11695689303085435No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC610.11324397579177961No Hit
CATAGACCATCCTCCCACCTTGACCTGCTCTTTGACTTATGATGGAGTTC600.11138751717224224No Hit
CATAGAAGGTGATAATCATGACAGCCATGCTGAAGTCCCATGATCTATGT600.11138751717224224No Hit
CATAGAGATCAATCCCTGTCTACATAACCACCCAGTACAGGAGCACCCTC580.1076745999331675No Hit
CATAGAGAATACAATGAACTGTGATGACACTCTTGGTCTTTGTGGATCTA560.10396168269409276No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCCATCCTACATGTGTCTATGTGTA560.10396168269409276No Hit
CATAGACATGAGTGGCCGAACAGACACTCTTGGTCTTTGTGGATCTATGT560.10396168269409276No Hit
CATAGACTACCACTACCCAGCACACCCAGTACAGGAGCACCCTCTATGTG540.10024876545501801No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)