FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806441

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806441
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46606
Sequences flagged as poor quality0
Sequence length150
%GC42

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG19004.076728318242286No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT16233.4823842423722264No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA14923.201304553061837No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA14563.1240612796635627No Hit
CATAGAGAGATTTTGGGCTGAGACGATGAGGTTTTCTAAATATACAATCA13142.819379479037034No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC12672.7185340943226195No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGCGTT11522.471784748744797No Hit
CATAGAAACCCCAAAGGCTATGTTCATTCTATGCCTTCATTCTGCCTGCA8301.7808865811268935No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA7831.680041196412479No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA7811.6757499034459085No Hit
CATAGAGGATCCCATCTGAGTTGGTCAAAGTCTGTGAGTAAAGTGCTAAT7401.587778397631206No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC7091.5212633566493585No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG6711.4397287902845126No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA6611.4182723254516587No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCAATTCCCAGACATAAGCCAGT6451.3839419817190919No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT6291.3496116379865253No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT6161.321718233703815No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT5701.223018495472686No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTGCTGGCTTGACTTTTCATCT5291.135046989657984No Hit
CATAGAAACCCCAAAGGCTATGTTCAGTGTACCTGATTGGCCATTTGAAC4981.068531948676136No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA4410.9462300991288676No Hit
CATAGATGCCCTTTTTGTGTACTTCCAATCTGTGAGTTGCTGATGCATCT4230.9076084624297301No Hit
CATAGAGGATCCCATCTGAGTTGGTCACACTGACTGATACAGGAAGGCCT3810.8174913101317427No Hit
CATAGATCCTCTCATTGTCCAGTTTGGACACTGACTGATACAGGAAGGCC3590.7702870874994635No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC3550.761704501566322No Hit
CATAGATGTATACAAGCTGTCACAGACAACATTTTTCTTCATTCAGCAAC3480.746684976183324No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTTGATTGTGTTATTGGTAAGG2600.5578680856542075No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA2560.549285499721066No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTATCCCCAGAAATGTTA2540.5449942067544952No Hit
CATAGATTGGAACTTTGCCAGCCTTATACGTGAATGTGGATCAGAACTTC2530.5428485602712098No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA2520.5407029137879243No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT2330.49993563060550145No Hit
CATAGACCTTTGGGTTCATATCATCTGGTAGAATCCTTTCCCTCACTCTC2300.49349869115564515No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA2300.49349869115564515No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCTACTCAGGAGGCTGAGGC2230.4784791657726473No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT2220.4763335192893619No Hit
CATAGAAACCCCAAAGGCTATGTTCACACTGACTGATACAGGAAGGCCTT2190.4698965798395056No Hit
CATAGAGATGTTTGATAAGCAGGGTGACTGATACAGGAAGGCCTTTCTAT2100.45058576148993695No Hit
CATAGAAACCCCAAAGGCTATGTTCACATTGACTGATACAGGAAGGCCTT2090.4484401150066515No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGGAGACAGCCGCTCACCT1990.4269836501737974No Hit
CATAGACAGAAACCACCCAGACAACCTGATTGGCCATTTGAACTCTATGA1970.42269235720722653No Hit
CATAGAACCTCTTTTGGGGCAAAGTTTCTCTGTTATTCAAAGGTTTTCTG1940.4162554177573703No Hit
CATAGATGCCCTTTTTGTGTACTTCCAATGGGCAAGCAATGACAGTCTAT1940.4162554177573703No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACTGATACAGGAAGGCCT1860.39909024589108694No Hit
CATAGACAGAAACCACCCAGACAACCACACTGACAAGCAATGGGGAAAGG1800.3862163669913745No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA1790.38407072050808905No Hit
CATAGAGCAACAGGGACTCTCATTCAACACTGACTGATACAGGAAGGCCT1770.3797794275415183No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT1720.3690511951250912No Hit
CATAGAGCTGGCTTCCTAACTTCCAACACTGACTGATACAGGAAGGCCTT1660.3561773162253787No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG1640.3518860232588079No Hit
CATAGATGAAAGCCTGTTGAATTTATGATCTATCCAGGAATTTTATTTTA1600.3433034373256662No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG1590.34115779084238085No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1550.33257520490923914No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCACCTGATTGGCCATTTGA1510.3239926189760975No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATATGTCTTTATCAGCAGCATT1460.3132643865596704No Hit
CATAGAACCTCTTTTGGGGCAAAGTTTTTCTGTTATTCAAAGGTTTTCTG1430.3068274471098142No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTACCTGATTGGCCATTTG1390.29824486117667254No Hit
CATAGAGAGATTTTGGGCTGAGACGAACACTGACGACATGGTTCTACTCA1370.2939535682101017No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT1330.28537098227696006No Hit
CATAGATCATGGGACTTCAGCATGGCCAACGTGATGAAACCCCATCTCTA1300.27893404282710377No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA1290.2767883963438184No Hit
CATAGAGCTGGCTTCCTAACTTCCAATGGGCAAGCAATGACAGTCTATGA1270.2724971033772476No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTAAATCTGTGAGTTGCTG1260.27035145689396217No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTACTTTTAGTAGAGATGGGGT1250.2682058104106767No Hit
CATAGAGCAACAGGGACTCTCATTCATACGTGAATGTGGATCAGAACTTC1180.2531862850276788No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGTATCCCCAGAAATG1170.25104063854439346No Hit
CNTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1160.24889499206110802No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTACACAAGCAATGGGGAA1150.24674934557782258No Hit
CATAGATGCCCTTTTTGTGTACTTCCACATAGATGCCCTTTTTGTGTGCT1140.24460369909453716No Hit
CATAGATCCTCTCATTGTCCAGTTTGGTCCTTTCCCTCACTCTCTCCATC1140.24460369909453716No Hit
CATAGACCTGGGCTTAGGGGCTATACATTCAGGAGAAGTGGCATCTATGT1130.24245805261125178No Hit
CATAGAACCTCTTTTGGGGCAAAGTTACACTGACTGATACAGGAAGGCCT1130.24245805261125178No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT1100.23602111316139554No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA1100.23602111316139554No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG1090.2338754666781101No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG1070.22958417371153927No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC1060.2274385272282539No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA1040.22314723426168304No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATTCTGTTATTCAAAGGTTT1020.2188559412951122No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCAAGTACAAGCAA1010.2167102948118268No Hit
CATAGAGCTGGCTTCCTAACTTCCAACCTTCCTAACCATGGGCATATCTA1010.2167102948118268No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTACAATGGGCAAGCAATG960.20598206239539973No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTATACCATTTTCCCCCAA960.20598206239539973No Hit
CATAGATCCCATCCAATAATAATGAGCACACTGACTGATACAGGAAGGCC920.19739947646225808No Hit
CNTAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT920.19739947646225808No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG910.19525382997897267No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGGTATCCCCAG880.18881689052911643No Hit
CATAGAGGATCCCATCTGAGTTGGTCTACGGTACCATTTTCCCCCAAGTC870.186671244045831No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTACGGTTGCACAGATCATTTA850.1823799510792602No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACAAGCAATGGGGA840.18023430459597475No Hit
CATAGACCTGGGCTTAGGGGCTATACCGTACCTGATTGGCCATTTGAACT830.17808865811268934No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC820.17594301162940396No Hit
CNTAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA820.17594301162940396No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGAGTCACTTCTTTTGATAATTC810.17379736514611852No Hit
CATAGATCCCATCCAATAATAATGAGCAACACTGACTGATACAGGAAGGC800.1716517186628331No Hit
CATAGACCAATAAAAGTTGATGGGATGAAGTAAGAAACATTTTAGAGCAC780.16736042569626228No Hit
CATAGAGGATCCCATCTGAGTTGGTCACACTGATCTATCCAGGAATTTTA770.16521477921297686No Hit
CNTAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA750.16092348624640604No Hit
CATAGATTCTGAAGAAATCAGATAGAGAGAAACAAATATGCTCCAAATTT740.15877783976312063No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA730.1566321932798352No Hit
CNTAGAGAGATTTTGGGCTGAGACGATGAGGTTTTCTAAATATACAATCA730.1566321932798352No Hit
CATAGAGCAACAGGGACTCTCATTCACACTGATCTATCCAGGAATTTTAT680.14590396086340815No Hit
CATAGATCCCATCCAATAATAATGAGCACAAAGTCACGAAAGTGGGTCTA660.14161266789683732No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT660.14161266789683732No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGATTTAATAAATTGTGAAATG660.14161266789683732No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCACACTGACTGATACAGGAAGG650.13946702141355188No Hit
CATAGATTGGAACTTTGCCAGCCTTAACACTGACTGATACAGGAAGGCCT650.13946702141355188No Hit
CNTAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC630.13517572844698109No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCTGTCTCCATAAAAAATA620.13303008196369565No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC610.13088443548041026No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA610.13088443548041026No Hit
CATAGATCCTCTCATTGTCCAGTTTGGACACTGATCTATCCAGGAATTTT590.1265931425138394No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGTCTGTTATTCAAAGG590.1265931425138394No Hit
CATAGACAGGGAGGCGTATAAGTGATGTACGGTAGCAGAATTACCTCTGG560.12015620306398318No Hit
CATAGATGCCCTTTTTGTGTACTTCCATACGGTAGCAGAATTACCTCTGG560.12015620306398318No Hit
CATAGAACTTCACAAGGGCTTTAGGGTACGGTAGCAGAATTACCTCTGGA560.12015620306398318No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA540.11586491009741234No Hit
CNTAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGCGTT540.11586491009741234No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA530.11371926361412694No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGGTTCTACA530.11371926361412694No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTACACTGATCTATCCAGG510.1094279706475561No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCGTACAATGGGCAAGCAATGA490.10513667768098528No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC490.10513667768098528No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCACACTGATCTATCCAGGAATT470.10084538471441447No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)