FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806449

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806449
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences123197
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC89177.238000925347208No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC66285.380001136391308No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA63755.174638992832618No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA63395.145417502049563No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT41873.398621719684733No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA36832.9895208487219658No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA35302.865329512893983No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA29502.394538828055878No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA29222.3718110018912797No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT26922.185118144110652No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT26082.1169346656168577No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC20661.6769888877164216No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC17541.4237359675966135No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA16151.31090854485093No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA15371.2475953148209777No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG14691.1923991655640964No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC13631.1063581093695465No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT13631.1063581093695465No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT13541.0990527366737826No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTTTTTGAGATGGAGTCTCACT12431.008953140092697No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT11110.901807673888163No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT9670.7849217107559437No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG9600.7792397542147942No Hit
CATAGAATTCCCCAATGTCCTGTGCATTGACAAGAGCCATTCTTTCTCCC9330.7573236361275031No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC8740.7094328595663856No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT8150.661542083005268No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT8010.6501781699229688No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA7860.6380025487633627No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG7690.6242035114491424No Hit
CATAGACAGTATGGGGGAAACGGCTCCCATGATTCAATAATCTCCCACCG7010.5690073621922612No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG6830.5543966168007338No Hit
CATAGAACTTGTGCTTTTGGTGTCACCACAGCCCAGTTTTCCTTCTCTAT6620.5373507471772851No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG6600.535727331022671No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG6330.51381121293538No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACTGTTCTCAGAGGCTGAACC6300.5113760887034586No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA6150.4992004675438525No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT5900.4789077656111756No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA5830.47322580907002604No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA5780.4691672686834907No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG5740.4659204363742624No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT5710.4634853121423412No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA5590.4537448152146562No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG5510.4472511505961996No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG5510.4472511505961996No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT5300.43020528097275096No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA5230.4245233244316014No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA5000.40585403865353864No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA4950.4017954982670033No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC4340.3522813055512716No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA4340.3522813055512716No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC4130.3352354359278229No Hit
CATAGACAGAACACCACACCCCTGTCACCACAGCCCAGTTTTCCTTCTCT4120.33442372785051583No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT3870.3141310259178389No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG3860.3133193178405318No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT3830.3108841936086106No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA3760.3052022370674611No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA3690.2995202805263115No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA3580.2905914916759337No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA3570.2897797835986266No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT3460.2808509947482487No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA3400.2759807462844063No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA3370.27354562205248506No Hit
CATAGATTTGGCACTCACATACACGCCCACAGCCCAGTTTTCCTTCTCTA3350.2719222058978709No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA3290.26705195743402843No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA3290.26705195743402843No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA3290.26705195743402843No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT3020.24513583934673736No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA2950.2394538828055878No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGTGTAGGATGACTTATGGAATCT2930.23783046665097365No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGCAAAAGGGTAAGAGTTCTATG2920.23701875857366655No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT2690.21834947279560377No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT2660.21591434856368255No Hit
CATAGAACCCTGCTTCCTAAATCAACAAGCACATTATTATTGGTTGGTTC2600.2110441000998401No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC2570.20860897586791888No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT2550.20698555971330473No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC2440.19805677086292683No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2380.1931865223990844No Hit
CATAGACCATGTAATACCATCGTGAGCAGGGCAAGTGTATGGTCAGTTCT2190.17776406893024993No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGATGACTTATGGAATCTGAAG2130.17289382046640747No Hit
CATAGAAGGGCAATTATCTCATCCTAGACTCCAGTCTCGGCAACAAGTCT2110.1712704043117933No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT1960.15909478315218714No Hit
CATAGAGTCATTCCAAACTGTGCACTTAGTGGTTAGTGGGGAGAGGACAC1880.15260111853373054No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA1860.1509777023791164No Hit
CATAGAATTGCCTACTTTGGGACCCAGTACAATGGGCACACTTAACACCT1830.14854257814719515No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT1810.14691916199258098No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC1810.14691916199258098No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAAACTAGTTCCAGCATGAGAAG1790.14529574583796684No Hit
CATAGACCATGTAATACCATCGTGAGCAGTTTGGGGGAAGAGAAACAGAA1770.14367232968335267No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG1760.1428606216060456No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAAGTATATGACACATTA1750.14204891352873852No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA1750.14204891352873852No Hit
CATAGAATTGCCTACTTTGGGACCCATCCAGCATGAGAAGAATGGCCTCT1710.1388020812195102No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC1630.1323084166010536No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC1610.13068500044643944No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATTCCAACTCTATAGATTAT1570.12743816813721112No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTCGTAAGGTTTTCCGGCTTGA1480.12013279544144743No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTCAGACAGGAATTAGAGCCAG1480.12013279544144743No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTCTCTTCCGCCTTTATCCTTCTAT1450.1176976712095262No Hit
CATAGAACCCTGCTTCCTAAATCAACAGAATCTATACAATGGGCACACTT1430.11607425505491206No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGGAACAAGGGCA1400.11363913082299082No Hit
CATAGACCCACTTACACACACAGGTTTTCCCCACTCACACGTGGTAATTT1360.11039229851376252No Hit
CATAGAATCCCTGCCCTTGACCTTGGACATGGTTCTACACATAGAATCCC1350.10958059043645545No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAACAAGGGCATGGTCAAGTG1350.10958059043645545No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAAGATGGAATCAATAAATAAAG1300.10552205004992005No Hit
CATAGACAGAACACCACACCCCTGTCTACTTAGGAGTTCTGGCCCCTGTC1290.10471034197261297No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG1290.10471034197261297No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGGGCAAGTGTATGGTCAGTT1270.10308692581799883No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC1260.10227521774069173No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)