FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806452

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806452
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42129
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1973246.837095587362626No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT14513.4441833416411503No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG13783.270906026727433No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG7391.754136105770372No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA5851.3885921811578723No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG5501.3055140164732133No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA4841.1488523344964277No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT3330.7904293954283274No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG3210.7619454532507299No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT3140.7453298203137981No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT3010.7144722162880676No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT2580.6124047568183436No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG2380.5649315198556814No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCATGTCGTCAGTGTAGAGGCA2160.5127109591967528No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG2010.4771060314747561No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC1970.46761138408222364No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA1960.46523772223409054No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT1950.4628640603859574No Hit
CATAGACTCACTCTGTCACCCAAGCTGGATTGCAGTGGCGCGATCTCTGC1740.413017161575162No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC1690.40114885233449643No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG1630.3869068812456977No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA1620.38453321939756463No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT1610.3821595575494315No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCAGTGTACTATGGCTTAAT1590.3774122338531653No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTAACCTGTGTATATTCT1580.37503857200503216No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT1490.3536756153718341No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG1400.3323126587386361No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC1380.32756533504236984No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1310.31094970210543804No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1250.2967077310166394No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA1190.2824657599278407No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG1120.2658501269909089No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1040.24686083220584396No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT1030.24448717035771084No Hit
CATAGAACCAACCCTGATTCTGCTGGAGGCTGAAACTCTAAGGGTCTATG1020.24211350850957772No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACACTCATAGAGGTTTCCTGG970.23024519926891215No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT970.23024519926891215No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA950.22549787557264592No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA940.2231242137245128No Hit
CATAGATCCCTGGCAAGAATTCCTCATACGGTAGCAGGAAAGTTGGAACC860.20413491893944788No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA860.20413491893944788No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTCTATGTGTAGCCATTGTCGCCT820.19464027154691543No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA820.19464027154691543No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA810.19226660969878231No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGGTAATTCTGGCCTTGTTCTATG810.19226660969878231No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA720.17090365306558428No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG710.16852999121745116No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA710.16852999121745116No Hit
CATAGACACAACGTTTGAGACTGCCTGATCTGTGACACCGAAAAACACCC710.16852999121745116No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG680.16140900567305183No Hit
CATAGAGCCATCATCATTTCTCACCCAGAGGCAAGGGTACTATTTTGATT680.16140900567305183No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTATAGAGGTTTCCTGGGCAT660.1566616819767856No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA650.15428802012865248No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA610.14479337273612No Hit
CATAGATAGCAGCAATCTCAGGCCTCTATGAGGTAAACAAACTTCTGGCC600.14241971088798688No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTACAGTGATGCAAGCATAGC600.14241971088798688No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA590.1400460490398538No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA560.13292506349545444No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCTCTATGTGTGTGACACCGAAAA560.13292506349545444No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGGTAATTCTGGCCTTGTTCTATGTG550.13055140164732132No Hit
TATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA540.1281777397991882No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA520.12343041610292198No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC480.11393576871038952No Hit
CATAGAGGTGAGCGGCTGCCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA480.11393576871038952No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGTCTCCACAAGTCCGCGCAGAGC470.1115621068622564No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA460.10918844501412328No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAGAAGCTTTGAGATTTGTG460.10918844501412328No Hit
GATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA440.10444112131785706No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA430.10206745946972394No Hit
CATAGATCCAGCTTCATCCATGTCCCTGCAAAGGACATGAACTCATTCTT430.10206745946972394No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)