FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806453

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806453
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125359
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1544812.32300832010466No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG82796.6042326438468715No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG69735.56242471621503No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC69665.556840753356361No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA56854.5349755502197695No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG51894.139311896234016No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT35152.8039470640320996No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT34132.7225807480914814No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA33482.670729664403832No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT29582.359623162277938No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG26932.1482302826282917No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC21661.7278376502684292No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA18641.4869295383658134No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA14351.1447123860273296No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG14311.1415215501080895No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA14051.12078111663303No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC14041.11998340765322No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA12741.0162812402779218No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC11690.9325217973978733No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT10740.8567394443159246No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG10370.8272242120629553No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG9980.7961135618503657No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG9530.7602166577589163No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC9000.7179380818289871No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG8050.6421557287470385No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC7870.6277969671104587No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA7630.6086519515950191No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG7190.5735527564833798No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG6800.5424421062707903No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT6050.4826139327850414No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCATGGTCTACCAGTTATTAGT5970.47623226094656146No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGACGCTATACCACACTA5770.46027808135036175No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT5500.4387399388954921No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCCAACTGTCTCTGAAAA5500.4387399388954921No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA5250.41879721440024253No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA4480.3573736229548736No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT4390.35019424213658373No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGATCATTGTTCACTGC4130.32945380866152413No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGCTCAGGTATGTCTTTATTAGCT3840.3063202482470345No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA3600.28717523273159484No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGATCATTGTTCACTGC3530.281591269872925No Hit
CATAGAGTGCCTGTTTCCTCATTCGTAGAGTGTCTGTTTCCCCACTCAAA3480.27760272497387506No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGACATGGCTCAGG3370.2688279261959652No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGGTGGAAGGGTAAGAGAG3350.2672325082363452No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG3150.2512783286401455No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT3090.2464920747612856No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT2970.23691956700356578No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT2880.2297401861852759No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTGCTGAAGTGATGGGCTAG2750.21936996944774606No Hit
CATAGACGGATTATTCTCTCCATGGTCTCAGTGTAGGCTAATCTGAAATC2630.20979746169002625No Hit
CATAGACCTCCGACAGTTTTTGTGCACCTTCATTGTTGCTCTATGAGACC2590.20660662577078628No Hit
CATAGAACAGATGTTCTCCTTGTTTTCTATAACCATACCTTCCCCACACC2570.20501120781116633No Hit
CATAGACATTTAATCCTCACAATGACCCATGATGTTCTTCCTTTTCTGCC2570.20501120781116633No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA2330.18586619229572668No Hit
CATAGAACAGATGTTCTCCTTGTTTTCTATAACACTGACGACATGGTTCT2280.18187764739667672No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGAAAAATTTCTATGAGA2170.1731028486187669No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA2110.16831659473990698No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCTACCTGACGCTATACCA2030.1619349229014271No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC2020.16113721392161712No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT2020.16113721392161712No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATAGACCAGCAGAGATCCCA1830.1459807433052274No Hit
CATAGAAAGGTGCAATCAAGCCAGTTGGCTCAGGTATGTCTTTATTAGCT1820.1451830343254174No Hit
CATAGAAATGATGCTGAAGGGCCTGCCACTGACGCTATACCACACTACAC1790.14278990738598743No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC1790.14278990738598743No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG1780.14199219840617747No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTAGCAGCATAATTTCCCAT1780.14199219840617747No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT1770.14119448942636748No Hit
CATAGACTCATTGCACTTTCCACAACTGCCCTCTCTGCTGTTCCTTCTAT1770.14119448942636748No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC1770.14119448942636748No Hit
CATAGACCCAAGACCCCAGCCTTTACACTGACGACATGGTTCTACACATA1710.13640823554750756No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA1700.13561052656769756No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACACATAGAAATGATGCTGAAGT1680.1340151086080776No Hit
CATAGATGGCCAAGATACGAGCACATAGAGATCCCACCATTTGCCATCTA1600.12763343676959774No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA1570.12524030983016776No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGATGCTGAAGTGATGGGCTAGAT1560.12444260085035777No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTCCGATCATTGTTCACTGCAGCC1550.12364489187054778No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCATCAGGAACCATGGG1530.12204947391092782No Hit
CATAGAGAAGACTCCCTCAACCCACCGCCAGGAAAGAATCCACCCACAGC1450.11566780207244794No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCACACTGACGACATGGTTCTACA1450.11566780207244794No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGAGACAGCCG1380.11008383921377804No Hit
CATAGAGTCTGAATGGTGGGAGAGTGCTGAAGTGATGGGCTAGATCTATG1260.1005113314560582No Hit
CATAGAAATGATGCTGAAGGGTCTGTTTCCCCACTCAAATACCATCTATG1260.1005113314560582No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGACATTGCTTCTT1260.1005113314560582No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)