FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806454

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806454
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125359
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1526212.174634449860001No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG81066.466228990339744No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG68635.474676728435933No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG67075.3502341275855745No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC55584.4336665097839No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG51024.069911214990547No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT34382.742523472586731No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA33132.6428098501104826No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG31502.512783286401455No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT29022.3149514594085785No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG26672.127489849153232No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC21731.733421613127099No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT18851.503681426941823No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT16111.285109166473887No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG13951.1128040268349302No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC13941.11200631785512No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA13831.1032315190772102No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT13551.0808956676425305No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA12571.0027201876211522No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG11600.9253424165795835No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT10490.836796719820675No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG10230.8160562863456153No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG9830.784147927153216No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC9490.7570258218396764No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC8870.7075678650914573No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG7880.6285946760902688No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC7690.6134382054738791No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT7470.5958886079180593No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG7010.5591939948468No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG6380.5089383291187709No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGATGAGCATGCCTTT5930.4730414250273215No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT5720.4562895364513119No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTTGTTACAAAAATTGGGA5600.446717028693592No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACTGTTAATATAGAAGAGACACA5280.4211903413396724No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG5230.4172017964406225No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT5070.4044384527636628No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT4480.3573736229548736No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT4320.3446102792779138No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGCCATGCTGAAGTCCC3950.31509504702494434No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCCTGGCCAACTGTTTTTT3810.3039271213076046No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTACGAATGAGGAAACA3470.27680501599406504No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGATGGGAGTGTCTG3380.26962563517577515No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTATGAGCAT3340.26643479925653524No Hit
CATAGACCCTCTCTTACCCTTCCACCACACTGTCATTGTGGGTTTTAACT3270.2608508363978653No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG3100.24728978374109556No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG3040.24250352986223567No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG3000.23931269394299573No Hit
CATAGATGAAGGCAGAAAAGGAAGAACATCTGTTCTATGTGTAGAACCAT2990.2385149849631857No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA2980.23771727598337575No Hit
CATAGATCTAGCCCATCACTTCAGCACACTGACGAATGAGGAAACAGGCA2700.21538142454869616No Hit
CATAGAACACGAAGATTTCAGATTAGCCTACACTGAGACCATGGAGAGAA2580.20580891679097632No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG2560.20421349883135634No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTATGGTTATAGAAAACAAGGAGAA2460.1962364090332565No Hit
CATAGATGAAGGCAGAAAAGGAAGAACATCATGGGTCATTGTGAGGATTA2450.1954387000534465No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA2380.1898547371947766No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT2070.16512575882066705No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT1970.1571486690225672No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGGTAGACTGTTAATATAGAAG1960.1563509600427572No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1960.1563509600427572No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC1820.1451830343254174No Hit
CATAGATCTCCTCTCTGTAATGCACCAACATGCTTTTAGTCACGTCTATG1780.14199219840617747No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAACTGGCTTGATTGCACCTTT1770.14119448942636748No Hit
CATAGATGACATGGGAAATTATGCTGCTACACTGACGAATGAGGAAACAG1760.14039678044655748No Hit
CATAGATTCCTCCAAAGACTGCAGGCCCTTCAGCATCATTTCTATGTGTA1750.13959907146674752No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC1740.13880136248693753No Hit
CATAGATGGCAAATGGTGGGATCTCTGCTGGTCTATGACAGTTGTGGAAA1720.13720594452731755No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTTGTGGAAAGTGCAATGAGTCTAT1720.13720594452731755No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC1720.13720594452731755No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGGCAGGCCCTTCAGCATCA1690.13481281758788757No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGCAGGCCCT1680.1340151086080776No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGCTCGTATCTTGGCCATCTA1590.12683572778978774No Hit
CATAGATCTAGCCCATCACTTCAGCATCAGCAGGCCCTTCAGCATCATTT1580.12603801880997775No Hit
CATAGAGGCTGCAGTGAACAATGATCGGACTTGGAGGCTGGAGAAAAAGC1570.12524030983016776No Hit
CATAGACCTCCCATGGTTCCTGATGACCTCCCATGATTTACCATCACAAA1520.12125176493111783No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCTGGGAGAAGAAATGTT1490.11885863799168787No Hit
CATAGAGGTGAGCGGCTGTCTCCATGATCTATGTAGAACCATGTCGTCAG1490.11885863799168787No Hit
CATAGAGGTGAGCGGCTGTCTCCATGTCGTCAGTGTGCCATGCTGAAGTC1410.11247696615320799No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGATTCTTTCCTGGCGGTGGGTTGA1400.111679257173398No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTGTAGAACCATGTCGTCAGTGTA1320.1052975853349181No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCCTTCAGCATCATTTCTATG1310.10449987635510812No Hit
CATAGAACTTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG1270.10130904043586819No Hit
CATAGATCTAGCCCATCACTTCAGCACTCTCCCACCATTCAGACTCTATG1270.10130904043586819No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)