FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806473

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806473
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences199053
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4215421.177274394256806No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA153817.727087760546186No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC108985.474923764022647No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA71383.5859796134697794No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC70883.5608606752975334No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA68313.431749333092191No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC64983.2644572048650358No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG63613.195631314273083No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA62093.1192697422294566No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG59993.013770201906025No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG35391.7779184438315423No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT34971.7568185357668562No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT33141.6648832220564371No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA29091.461419822861248No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC28761.444841323667566No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC24381.2247994252786947No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT21211.0655453572666576No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTCAGACATGTTTCCTAG19610.9851647551154717No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC16880.8480153526950109No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG16510.8294273384475491No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGTGAGAAATGATGATGGC14320.7194063892531135No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT14300.7184016317262237No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG13370.6716804067258468No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC12240.6149116064565718No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT11890.597328349736No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTGATCTGAGCAAGGATA10720.5385500344129452No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG10710.5380476556495004No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT9480.47625506774577625No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG7670.38532451156224723No Hit
CATAGAATGCAGGAGAATATACACAGGTTTACGGTAGCTGCTTTTCTCTT7070.35518178575555254No Hit
CATAGAATGCAGGAGAATATACACAGGTTTCCTGGGTGAGAAATGATGAT6810.34211993790598483No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGCTCATACAGAATTAGATC5820.2923844403249386No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGC5640.2833416225829302No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGGGACATGGATGA5600.28133210752915055No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT5270.26475360833546846No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC5230.2627440932816888No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC4900.2461655940880067No Hit
CATAGAGCTATCAGTATACTCCCACCATGACTTCAGTTGACTATAAGAAA4610.23159660994810427No Hit
CATAGACCCTTAGAGTTTCAGCCTCAGACATGTTTCCTAGTTTCAGTTCT4530.22757757984054497No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT4530.22757757984054497No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG4380.2200418983888713No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC4280.2150181107544222No Hit
CATAGAGAATTTGTACACCACGGGACATGGATGAAGCTGGATCTATGAGA4280.2150181107544222No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC4180.20999432311997307No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT4150.20848718682963835No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA3870.1944205814531808No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG3630.18236349113050293No Hit
CATAGATGTCTCCTAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC3330.16729212822715558No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACTCTTCACTATGTCATC3330.16729212822715558No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGGACATGGATGAAGCTGGATCTA3320.16678974946371067No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC3110.15623979543136754No Hit
CATAGAACAATGTAATAAGCATCGGAGGAGAGGCAGTCTCAAACGTTGTG3080.1547326591410328No Hit
CATAGACAGCTCACAGACTGCATACTACACTGGAGACAGCCGCTCACCTC3050.15322552285069807No Hit
CATAGACCCTTAGAGTTTCAGCCTCCCCCAGTATTTCATTATTAAAAGTT2980.14970887150658369No Hit
CATAGAACTATGTCAAGAGAATTTTGCACAGAATTAGCGGAGAGTGAGAA2970.14920649274313874No Hit
CATAGATTCTCCCTTGTGCTTTTGGTGACTTGTGCTCATACAGAATTAGA2660.1336327510763465No Hit
CATAGAGCTATCAGTATACTCCCACCATGAGGAATTCTTGCCAGGGATCT2630.13212561478601176No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT2580.1296137209687872No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT2430.12207803951711353No Hit
CATAGAACAATGTAATAAGCATCGGAGGAGGCCTGAGATTGCTGCTATCT2250.11303522177510512No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCTCATAGAAAGGGACCATGC2140.1075090553772111No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT2070.1039924040330967No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2040.10248526774276198No Hit
CATAGAGCTATCAGTATACTCCCACCATGGTGGGTGCCTGATTGTTCTAT2010.10097813145242725No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTCAGACATGTTTCCTAGTT2000.10047575268898232No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)