FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806474

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806474
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences199053
Sequences flagged as poor quality0
Sequence length150
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4222221.21143615017106No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT157367.9054322215691295No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG119656.010961904618368No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA71133.5734201443836566No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG70223.5277036769101695No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT69973.5151442078240467No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA65903.3106760511019675No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG64873.2589310384671415No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT62803.154938634434045No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG62743.1519243618533754No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG36041.8105730634554618No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT35141.7653589747454197No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT33071.6613665707123229No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT29771.495581578775502No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC29011.4574007927536887No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA25221.2669992414080673No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT21381.074085796245221No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTAACCTGTGTATATTCT19350.9721029072659041No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA16670.8374653986626677No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC16000.8038060215118585No Hit
CATAGAGCCATCATCATTTCTCACCCAGAAGCTTTGAGATTTGTGTCTGT14610.7339753733930159No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC14460.7264396919413423No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA12320.6189306365641312No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT12010.6033568948973389No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG11660.585773638176767No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTGCCATACCAAGAATAAGAA10960.5506071247356231No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG10930.5490999884452884No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT9640.4842931279608948No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG7590.38130548145468796No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCTACCGTAAACCTGTGTATATTCT6930.34814848306732377No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAACCTGTGTATATTCTCCTG6680.335589013981201No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC5840.2933891978518284No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG5550.27882021371192595No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTACTATGGCTTAATGTTTCT5470.27480118360436667No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC5130.2577203056472397No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG4930.24767273037834145No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT4710.2366203975825534No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTCTATG4560.2290847161308797No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGGCTGAAACTCTAAGGGTCT4500.22607044355021025No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCATGGTGGGAGTATACTGA4470.2245633072598755No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT4220.21200383817375273No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGTAGCAGAGACTTGGTCTC4140.2079848080661934No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA4140.2079848080661934No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC4050.20346339919518922No Hit
CATAGATCCCTGGCAAGAATTCCCCAATATGAACAGAAAGAAGCTCTATG3760.18889441505528679No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTAGTATGCAGTCTGT3340.1677945069906005No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCTCTTCTTCCTCCTCCTGTCTA3340.1677945069906005No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG3240.16277071935615137No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGTATGCAGTCTGTGAGCTGTC3060.15372790161414296No Hit
CATAGACACAACGTTTGAGACTGCCTCTCCTCCGATGCTTATTACATTGT3010.1512160077969184No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGCAAAATTCTCTTGACATAG2980.14970887150658369No Hit
CATAGAGAAACTTTTAATAATGAAATACTGGGGGAGGCTGAAACTCTAAG2960.14870411397969385No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGTCACCAAAAGCACAAG2720.13664702365701598No Hit
CATAGATCCCTGGCAAGAATTCCTCATGGTGGGAGTATACTGATAGCTCT2630.13212561478601176No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC2450.12308279704400335No Hit
CATAGATAGCAGCAATCTCAGGCCTCCTCCGATGCTTATTACATTGTTCT2250.11303522177510512No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG2130.1070066766137662No Hit
CATAGATCAAGGTGTGAGCATGGTCCCTTTCTATGAGCAGGAAAGTTGGA2100.10549954032343144No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC2020.10148051021587215No Hit
CATAGAACAATCAGGCACCCACCATGGTGGGAGTATACTGATAGCTCTAT2000.10047575268898232No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)