FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806475

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806475
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48224
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2265046.96831453218315No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA13662.8326144658261447No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT11492.3826310550763106No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTTCTAC9611.9927836761778366No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC9081.882879893828799No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC8571.7771234240212344No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC5481.1363636363636365No Hit
CATAGACCTTCCTGTTGGCCACACAGGAGGATCACTTGAGCACAGGAATT5441.1280690112806901No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG5081.053417385534174No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC5041.0451227604512277No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT3720.7714001327140013No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT3370.6988221632382217No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA3000.6220968812209687No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT2740.5681818181818182No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG2740.5681818181818182No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA2290.47486728599867284No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA2120.4396151293961513No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTTCTA2010.41680491041804907No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG1970.4085102853351029No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT1960.4064366290643663No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTTGCACCACTGCACTCCAG1650.3421532846715329No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC1450.3006801592568016No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT1400.2903118779031188No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC1400.2903118779031188No Hit
CATAGACCCTTAGAGTTTCAGCCTCCTGACTGGCTAGGACTACAGGCATG1360.28201725282017254No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1320.2737226277372263No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1310.2716489714664897No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC1280.26542800265428No Hit
CATAGAACAATGTAATAAGCATCGGAGGAGAATTAGCGGAGAGTGAGAAC1260.2612806901128069No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACATGGTGGGTG1170.2426177836761778No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1150.23847047113470474No Hit
CATAGACCTTCCTGTTGGCCACACAGCCAGGAAGAGGTGGAGTCAGGGTT1130.2343231585932316No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC1130.2343231585932316No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT1120.232249502322495No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT1120.232249502322495No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTATGGGCAACAGA1060.21980756469807566No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT1060.21980756469807566No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1040.21566025215660253No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG1010.20943928334439285No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1010.20943928334439285No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC970.2011446582614466No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG940.19492368944923688No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG930.19285003317850033No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC880.18248175182481752No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG850.17626078301260784No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG840.17418712674187126No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG840.17418712674187126No Hit
CATAGACAGCTGACCAGAAAATGTTTCACATATACACCATGGAATACTAT820.17003981420039813No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTCAGTGTGCTGCTTTTCTC810.16796615792966157No Hit
CATAGATTCTCCCTTGTGCTTTTGGTCAGTGTGAGAGGTCTTGGCAGGCT810.16796615792966157No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCAAGATTTATTGTGAAGAGTAAAA780.1617451891174519No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG770.15967153284671534No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG730.15137690776376908No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT710.14722959522229595No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGGGACATGGATGA660.13686131386861314No Hit
CATAGACCTTCCTGTTGGCCACACAGGCAGGAAGAGGTGGAGTCAGGGTT640.13271400132714No Hit
CATAGACTTGATGCCCAGGAAACCTCTAAAAAGATGCTCTTCCTCATTCG630.13064034505640346No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC610.12649303251493033No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA610.12649303251493033No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC600.12441937624419377No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTTCTACACA600.12441937624419377No Hit
CATAGAACTATGTCAAGAGAATTTTGCACAGAGAGGTCTTGGCAGGCTTG590.12234571997345721No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACACTGACGACATGGTTCTA590.12234571997345721No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGATCTGCG550.11405109489051093No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC550.11405109489051093No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA540.1119774386197744No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCAAGATTTATTGTAGAGAGCAAAA530.10990378234903783No Hit
CATAGACCCTTAGAGTTTCAGCCTCCGCTAAGCCGAGAAGATCTCTATGA520.10783012607830127No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCACCTTTCTGAGTTTTTAAGAA510.1057564698075647No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG510.1057564698075647No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG500.10368281353682814No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)