FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806477

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806477
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences133565
Sequences flagged as poor quality0
Sequence length150
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC77765.821884475723431No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA62604.686856586680642No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA58184.355931568899038No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC50893.810129899299966No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA39592.9640998764646427No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT35732.675102010257178No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA35542.6608767266873805No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA34452.5792685209448583No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA30152.2573278927862837No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG25441.904690600082357No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT22681.6980496387526671No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG21171.58499606932954No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA16631.2450866619249055No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA16181.2113952008385431No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC15751.1792011380226854No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA14911.1163104106614756No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA13401.0032568412383485No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG12540.9388687156066335No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC11830.885711077003706No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT11720.8774753865159286No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG11510.861752704675626No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC11160.8355482349417886No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA10730.8033541721259313No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG10040.7516939317935087No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC9610.7194998689776513No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTAGGATGACTTATGGAATC9470.7090180810841163No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT8490.6356455658293714No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGAACAAGGGCATGGTCAAGTG8460.6333994684236139No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT8400.628907273612099No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA8310.6221689813948265No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC8170.6116871935012915No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT7980.5974619099314941No Hit
CATAGAGCACCCAACTATCCTTCAGCACACTGACGACAATGGGCACACTT7970.5967132107962415No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT7770.5817392280911915No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT7450.5577808557631115No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG7240.5420581739228091No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT6930.5188485007299817No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA6770.5068693145659416No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCTCTCTTCCGCCTTTATCCTTCTAT6670.49938232321341663No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGGCAAGTGTATGGTCAGTT6460.48365964137311424No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG6190.4634447647212967No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGGAATTAGAGCCAGTTCTGAG6080.45520907423351925No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT5980.4477220828809943No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA5970.44697338374574175No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAAGTATATGACACATTA5860.4387376932579643No Hit
CATAGACCCACTTACACACACAGGTTTGATGATCTAGCTTCGGAATGTTT5520.41328192265937935No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG5430.40654363044210684No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC5360.4013027364953394No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA5050.3780930633025119No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCACACTGACGACAAGGTTTTCC4950.3706060719499869No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCTTTTAGCTATTAAGATGTTG4880.36536517800321944No Hit
CATAGAAGGGCAATTATCTCATCCTAGACTAGAAGGGCAAGTGTATGGTC4820.3608729831917044No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT4740.3548833901096844No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT4730.35413469097443195No Hit
CATAGATCATGAATGACTCCCACTCTGCTACCGTATTGTCCTTGCACACC4610.3451503013514019No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT4570.3421555048103919No Hit
CATAGAAGGGCAATTATCTCATCCTAGACTACACATAGGATGACTTATGG4550.340658106539887No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA4490.33616591172837196No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA4330.324186725564332No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA4320.3234380264290795No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATTCCAACTCTATAGATTAT4310.322689327293827No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG4240.31744843334705947No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAACACTGACGACAAGGTTTTC4150.310710141129787No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT4100.3069666454535245No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA4050.303223149777262No Hit
CATAGATGCACCAGAAGCCACCTACCGTACTGGGAGGAACAGGGAGATGT4000.2994796541009995No Hit
CATAGACCCCCATGCAACCACATCTATGAGACCAACTGGTGGTGCTGGAA3950.295736158424737No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA3950.295736158424737No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGACCTTTTAGCTATTAAGATG3920.2934900610189795No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTACCGTAGGATGACTTATGGAA3890.291243963613222No Hit
CATAGACCCACTTACACACACAGGTTTGGGGGAAGAGAAACAGAATCTAT3820.28600306966645456No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACCCGTAATCCCTCCCTTTTC3800.28450567139594957No Hit
CATAGATCATGGGACTTCAGCATGGCTCTCTTCCGCCTTTATCCTTCTAT3730.27926477744918204No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTACAGCCTACATCCCTCAT3630.27177778609665704No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTTTGGGGGAAGAGAAACAGAA3620.27102908696140454No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT3620.27102908696140454No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA3570.26728559128514207No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT3450.25830120166211207No Hit
CATAGACCCCCATGCAACCACATCTATGTCCATCAGAGCATCACCCCTTC3400.2545577059858496No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGTGTTGATCTAGCTTCGGAATGT3370.25231160858009205No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGCAAAAGGGTAAGAGTTCTATG3300.24707071463332458No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC3290.2463220154980721No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG3290.2463220154980721No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3240.2425785198218096No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAAGGATGACTTATGGAATCT3230.24182982068655712No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT3180.2380863250102946No Hit
CATAGAGCACCCAACTATCCTTCAGCACTCCTACAATCCTGGCAAAAGGG3130.2343428293340321No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGAAAAGTAGGGGACAGTTCTAT3080.23059933365776963No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGTGGTGCTGGAACTAGTTCTAT3020.22610713884625463No Hit
CATAGAGTCATTCCAAACTGTGCACTTCACTTGATCATCCATTGTCTGCT3010.22535843971100214No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA2940.22011754576423465No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCAAGTATATGACACATTACA2940.22011754576423465No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGGAAAATGTCAGTGGGCCATC2930.21936884662898215No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG2900.21712274922322466No Hit
CATAGAGCATCCTCGTAATAGCAAACATTAGCCAGTAGGAATTAGAGCCA2840.21263055441170967No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT2810.21038445700595215No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGAATTAGAGCCAGTTCTG2800.20963575787069966No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC2700.20214876651817468No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGGTGGTGCTGGAACTAGTTCTA2660.1991539699771647No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATTGTCCTTGCACACC2640.19765657170665968No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGAACAAGGGCATGGTCAAGTGT2630.19690787257140718No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA2550.19091827948938717No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTACACATAGATCTGGGAGGAACAG2510.18792348294837719No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA2500.1871747838131247No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT2400.1796877924605997No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGGCAAGTGTATGGTCAGT2390.17893909332534721No Hit
CATAGATGCACCAGAAGCCACCTACCAGATCTGGGAGGAACAGGGAGATG2270.16995470370231724No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGGAACAAGGGCA2190.16396511062029723No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT2120.15872421667352973No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA2110.15797551753827724No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA1960.14674503050948975No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC1950.14599633137423726No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG1940.14524763223898476No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT1930.14449893310373227No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT1850.13850934002171228No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTACAAGCACATTATTATT1850.13850934002171228No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGTGCCCTGTGATTGTCCTGGTC1820.1362632426159548No Hit
CATAGAATTGCCTACTTTGGGACCCAAGTATATGACACATTACACCAGTC1810.13551454348070227No Hit
CATAGACCATGTAATACCATCGTGAGCAGATCTATGGGAGGAACAGGGAG1790.13401714521019728No Hit
CATAGACAGTCCTGCCGTGTACATGTCAGTCCTGCCGTGTACAGCCTACA1780.13326844607494479No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC1640.1227866581814098No Hit
CATAGACAGAACACCACACCCCTGTCCACAGCCCAGTTTTCCTTCTCTAT1590.1190431625051473No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGGGCAATTATCTCAACTCCCA1510.11305356942312732No Hit
CATAGAAAAGTCACCATGCAGCCCTGAGGTTCTTCAACACAGCTATTCTA1500.11230487028787482No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC1500.11230487028787482No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA1490.11155617115262231No Hit
CATAGACCCACTTACACACACAGGTTTATGTGTGGGAGGAACAGGGAGAT1440.10781267547635982No Hit
CATAGATGCACCAGAAGCCACCTACCGTACATCGGCCGCACTGAAATTGT1430.10706397634110733No Hit
CATAGACAGTCCTGCCGTGTACATGTACACTGACGACCTTTTAGCTATTA1420.10631527720585483No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTCTGCCTTAG1410.10556657807060234No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA1370.10257178152959234No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCGTGTACAGCCTACATCCCTCATC1360.10182308239433983No Hit
CATAGATTTGGCACTCACATACACGCACACTGACGACATGGTTCCAACTC1350.10107438325908734No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTGTCATAAAACAATGGGCACAC1350.10107438325908734No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAACAAGGGCATGGTCAAGTG1350.10107438325908734No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)