FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806486

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806486
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98544
Sequences flagged as poor quality0
Sequence length150
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2838528.8043919467446No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT45104.576635817502842No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT29633.0067786978405584No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA23772.412120474102939No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG23352.36949991881799No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA20182.047816203929209No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA15271.5495616171456406No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA11921.2096119499918818No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT11771.1943903231044No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA11591.176124370839422No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT9500.9640363695405099No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA9460.9599772690371813No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT9250.9386669913947069No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA9240.9376522162688747No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG9040.9173567137522326No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA8920.9051794122422472No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA8680.8808248092222764No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA8250.8371894788114953No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG8150.8270417275531742No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG7950.8067462250365319No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT7800.7915245981490502No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7670.7783325215132326No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA6330.6423526546517292No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG6160.6251014775125833No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT6030.6119094008767657No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT5180.5256535151810359No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC4610.46781133300860533No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG4500.456648806624452No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC4400.4465010553661309No Hit
CATAGACCACACACACAACTGAGAGTGGAGGAGAATGATATTGTTGCAGA4390.44548628024029874No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTAGAAGTGTATTAATTAT4220.42823510310115276No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC4220.42823510310115276No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC4050.41098392596200684No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT4030.4089543757103426No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT3960.40185094982951775No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGATAGCGAGAAGAGT3850.39068842344536453No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATCAGAAGCATCTATGTGTA3710.3764815716837149No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTCTAGGAGGAGCTGACTTACTG3660.3714076960545543No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA3590.3643042701737295No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT3330.3379201169020945No Hit
CATAGATATTCTGCCCCCTCCTCTCCTCTTGCTCCTTCTCACACAAATCT3310.33589056665043027No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA3170.3216837148887806No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG3170.3216837148887806No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA3150.31965416463711643No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC3120.31660983925962005No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT3060.3105211885046274No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA3060.3105211885046274No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT3050.30950641337879525No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2980.30240298749797045No Hit
CATAGAGGCACAGGGATAATGAGGGAGATCAGGGCAGAGAGTGTGTTGTA2910.2952995616171456No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGTGATAGTGAGTTCTCAAGA2880.2922552362396493No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA2820.2861665854846566No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCAGGA2800.2841370352329924No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTACAGGGCAGAGAGTGTGTT2770.281092709855496No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGAAACAACAATGCCTCAC2740.2780483844779997No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGTGTAGAACCATGT2740.2780483844779997No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT2550.25876765708718946No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCGTCAGTGTTGGGAAAGGT2480.25166423120636466No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAGAGGAGAATGATATTGTTGC2400.24354603019970775No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT2310.23441305406721868No Hit
CATAGACACAGGCCAATCTCAGCAGAGAGTGTGTTGTATTCTATGTGTAG2240.22730962818639389No Hit
CATAGACCCCCTTGAGTTCACTGGACTACGGCAACATATCAGAAGCATCT2170.2202062023055691No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC2120.2151323266764085No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA2090.21208800129891214No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT2000.20295502516642314No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGAGGAGAATGATATTGTTGCA1930.19585159928559834No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT1920.1948368241597662No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAATGGCTTCCA1790.18164474752394869No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCATCCAGTCCAT1780.18062997239811657No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT1700.17251177139145965No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA1650.16743789576229906No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1580.16033446988147426No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG1570.15931969475564214No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGAAAGGTATGTGG1530.1552605942523137No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1520.15424581912648155No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCCCAAAGTGCTGGGATTACAGGC1510.15323104400064946No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTTGGGAGGCTGAGGCA1480.1501867186231531No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTACGGTAGCAGAGACTTGTCTC1470.149171943497321No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1470.149171943497321No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1420.1440980678681604No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCCCAGGTAGCAAAACAGAGTCTA1400.1420685176164962No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGTTAATGGCTTCCA1400.1420685176164962No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG1400.1420685176164962No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCCCGAGTATCTGGGACTACAGGT1360.13800941711316772No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTAGCAGGAAACATTGGAAAGATG1300.13192076635817504No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA1260.12786166585484657No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC1260.12786166585484657No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1250.12684689072901445No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1250.12684689072901445No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1250.12684689072901445No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1210.122787790225686No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCCAGTGGCTACGACTGCAGGCAT1180.11974346484818965No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT1150.1166991394706933No Hit
CATAGACCACACACACAACTGAGAGTCACTGAGCTGAGGGTCACTTCTAT1130.11466958921902907No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG1120.11365481409319694No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1100.11162526384153272No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1100.11162526384153272No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGCAGGCTGAGGGA1100.11162526384153272No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC1090.11061048871570059No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT1070.10858093846403637No Hit
CATAGACACAGGCCAATCTCAGCAGAGGTAGATGGATCATCTATGTGTAG1050.10655138821237214No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAGCATTCTCTC1040.10553661308654001No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT1030.10452183796070792No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1020.10350706283487579No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAACTTATCTGGGCACG1000.10147751258321157No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG990.10046273745737944No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)