FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806490

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806490
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences123547
Sequences flagged as poor quality0
Sequence length150
%GC35

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA90197.300055849190996No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT71455.783224198078464No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA53604.3384299092653No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT46643.7750815479129405No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT46173.737039345350353No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG43673.5346872040599933No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA37693.0506608820934544No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA33652.723659821768234No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG28072.2720098424081523No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT19391.5694432078480254No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG19331.5645867564570568No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA14821.199543493569249No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA14681.1882117736569888No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTGCTCCTTCTCACACA13361.081369843055679No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA12971.0498029090143832No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC12521.0133795235821186No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG11260.9113940443717775No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA10360.8385472735072482No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA9350.7567970084259431No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT9160.7414182456878758No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGTTTACTCGGAGATTTGACTGT8880.7187548058633556No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT8810.7130889459072256No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC8450.6839502375614138No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT8420.6815220118659295No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT8310.6726185176491537No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC8290.6709997005188308No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCACTGAGCTGAGGGTC7760.6281010465652748No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT7570.6127222838272075No Hit
CATAGACCATCCCTTCTACAAGAGGCACATAGACCTTTTTCTGTAGTCAA6750.5463507814839696No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT6390.5172120731381579No Hit
CATAGACACAGGCCAATCTCAGCAGAAGTGTATTAATTATCTATGGCTGC6380.5164026645729966No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG6310.5107368046168664No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA6270.5074991703562207No Hit
CATAGACCACACACACAACTGAGAGTCACTGAGCTGAGGGTCACTTCTAT5890.4767416448800861No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT5830.47188519348911756No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAAGCTTACACTGCACATGG5670.45893465644653453No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT5660.4581252478813731No Hit
CATAGAGCCCCCAGAGAAGAATGACCGCCCCCAGGTAGCAAAACAGAGTC5510.44598411940395155No Hit
CATAGAGCCCCCAGAGAAGAATGACCACACTGGGAAAGGTATGTGGCACA5390.4362712166220143No Hit
CATAGACCATCCCTTCTACAAGAGGCAGTGTGGGTAGAGAGTTCTGTAGA5220.4225112710142699No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT5180.4192736367536241No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC4980.4030854654503954No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT4950.4006572397549111No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC4760.3852784770168438No Hit
CATAGAAACAGCAAAGCCCTCCACCACTGAAGCAGAGGTAGATGGATCAT4730.3828502513213595No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGCAACATATCAGAAGCATCT4640.37556557423490655No Hit
CATAGATCCCATACTCCTCCATTACCCTACGATAGCGAGAAGAGTGGAGG4500.36423385432264643No Hit
CATAGAGTCCTTCCCTCTCACACATGTTACGGCAACATATCAGAAGCATC4500.36423385432264643No Hit
CATAGAAACAGCAAAGCCCTCCACCAGGGCAGAGAGTGTGTTGTATTCTA4220.3415704144981262No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC4170.33752337167231905No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT4070.32942928602070465No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA3940.31890697467360596No Hit
CATAGAACCAACCTCTCTATCTCCGTCAGTGTAGAAGTGTATTAATTATC3910.31647874897812167No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT3720.3010999862400544No Hit
CATAGACACACTGACAATTTGCACCTGTACGGAAGACACAGCACACTCTT3710.300290577674893No Hit
CATAGATTCAACCAGCCATCCCCAATACGGTCACTGACAGGTCTTAAAGC3520.28491181493682566No Hit
CATAGAGCAGCATTTCTCTCCAAGGATAGCGAGAAGAGTGGAGGCTCTAT3400.2751989121548884No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC3380.27358009502456554No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC3370.2727706864594041No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGCTCTGTTTACTCGGAG3360.2719612778942427No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC3340.27034246076391977No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC3300.26710482650327405No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTGGGAAAGGTATGTG3280.2654860093729512No Hit
CATAGATACCTGTCCTCTGCCTCGAGTACGGAAGACACAGCACACTCTTC3260.2638671922426283No Hit
CATAGAGGCACGATCTTGTTTCACTGTATAGGAGGAGCTGACTTACTGTT3250.2630577836774669No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT3240.2622483751123055No Hit
CATAGACACACTGACAATTTGCACCTGTACGATAGCGAGAAGAGTGGAGG3120.2525354723303682No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACGGCAACATATCAGAAGCAT3090.2501072466348839No Hit
CATAGATTCAACCAGCCATCCCCAATAGACCTTTTTCTGTAGTCAAGTGA3070.24848842950456101No Hit
CATAGAACCAACCTCTCTATCTCCGTAGTGATCTACAGTTTCAATACTAT3000.24282256954843096No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTACGATAGCGAGAAGAGTGGAGGC2980.2412037524181081No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGGCAACATATCAGAAGCA2930.2371567095923009No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAACACTGACAACAATGCCTCACA2910.23553789246197804No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAATCTTTGGGAGGCTATTAG2870.23230025820133227No Hit
CATAGAGGCACGATCTTGTTTCACTGTGAAAAAGAACTGGGAAAGGTATG2860.23149084963617084No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCACTATTCTCTGGCCCGTCTAT2830.22906262394068655No Hit
CATAGACACACTGACAATTTGCACCTGTACATTAGGAATCTTTGGGAGGC2780.22501558111487938No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGATAGCGAGAAGAGT2760.2233967639845565No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTACGGAAGACACAGCACACTCTTC2750.22258735541939503No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCACTGAGCTGAGGGTCACTTC2750.22258735541939503No Hit
CATAGACACACTGACAATTTGCACCTGTACATAGCTTACACTGCACATGG2740.2217779468542336No Hit
CATAGAGCCCCCAGAGAAGAATGACCTACGGTAGCTTACACTGCACATGG2720.22015912972391077No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC2710.21934972115874932No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTACGATAGCGAGAAGAGTGGAG2710.21934972115874932No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT2700.21854031259358786No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT2700.21854031259358786No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACACGGAAGACACAGCACACTCTT2630.21287445263745783No Hit
CATAGATCCCATACTCCTCCATTACCCTACGGCAACATATCAGAAGCATC2630.21287445263745783No Hit
CATAGATCACCAGATGCCAGTTGTGCGTCAGTGTAGGAATCTTTGGGAGG2620.21206504407229637No Hit
CATAGAACCAACCTCTCTATCTCCGTACGATAGCGAGAAGAGTGGAGGCT2620.21206504407229637No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATAACTTATCTGGGCACGGTGG2530.20478036698584343No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2480.20073332416003625No Hit
CATAGAACCAACCTCTCTATCTCCGTGGTCTCATAGAACTAACCTCCCAC2480.20073332416003625No Hit
CATAGAAACAGCAAAGCCCTCCACCACTTTTCCCCAGGTAGCAAAACAGA2450.19830509846455197No Hit
CATAGACCAAGAGTTGACAAGGATCTGGAGGAGAATGATATTGTTGCAGA2380.1926392385084219No Hit
CATAGATCCCATACTCCTCCATTACCCTACACTGGGAAAGGTATGTGGCA2380.1926392385084219No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTCTTCAGCTCTTTGAGGCAT2330.18859219568261473No Hit
CATAGACACACTGACAATTTGCACCTGTAGCAGAGACCTTTTTCTGTAGT2300.18616396998713042No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA2210.17887929290067747No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTACGGCAACATATCAGAAGC2210.17887929290067747No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAGGAGCTGACT2200.17806988433551602No Hit
CATAGACCACACACACAACTGAGAGTGCAATATGGGCTGGGTGATCTATG2010.16269112159744875No Hit
CATAGATCCCATACTCCTCCATTACCCTCACTGAGCTGAGGGTCACTTCT2010.16269112159744875No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAACAATGCCTCACACACAGGTCTA2010.16269112159744875No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTTGGGAAAGGTATGT2010.16269112159744875No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG1990.16107230446712587No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGACCTTTTTCTGTAGTCAAGT1970.15945348733680298No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC1960.15864407877164158No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTAGGTAGTCGAGGAATCTTTGGG1960.15864407877164158No Hit
CATAGAGGCACGATCTTGTTTCACTGTACACTGGGAAAGGTATGTGGCAC1940.1570252616413187No Hit
CATAGAGGCACAGGGATAATGAGGGAGATCAGACCTTTTTCTGTAGTCAA1930.15621585307615726No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATAGGGCACTGAGACCACATCT1890.15297821881551152No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGGCATTCTCTCA1860.1505499931200272No Hit
CATAGACCACACACACAACTGAGAGTGTGTGATCTACAGTTTCAATACTA1830.1481217674245429No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA1700.1375994560774442No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGGAATCTTTGGGAGGCTA1700.1375994560774442No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAAACATTGGAAAGATGGGGATC1660.13436182181679848No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACGATAGCGAGAAGAGTGGAGGCT1660.13436182181679848No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTGCATTCTCTCAGG1630.13193359612131414No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT1620.13112418755615274No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGGAATCTTTGGGAGGCTATTA1610.13031477899099128No Hit
CATAGATATTCTGCCCCCTCCTCTCCACGATAGCGAGAAGAGTGGAGGCT1590.12869596186066842No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACAGGGCAGAGAGTGTGTTGT1580.12788655329550697No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1580.12788655329550697No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1560.1262677361651841No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATCCCCAGGTAGCAAAACAGAGTC1540.12464891903486122No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT1530.12383951046969978No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATGATCACTGAGCTGAGGGTC1510.12222069333937692No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTACACTGAAGCAGAGGTAGATGG1470.11898305907873116No Hit
CATAGACCACACACACAACTGAGAGTCTATGTCTTCAGCTCTTTGAGGCA1440.11655483338324686No Hit
CATAGAGGTGAGCGGCTGTCTCCAACAATGCCTCACACACAGGTCTATGT1440.11655483338324686No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG1400.1133171991226011No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTTCAGCTCTTTGAGGCATCTAT1380.11169838199227825No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGAAGTGTATTAAT1370.1108889734271168No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1370.1108889734271168No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGGGAAAGGTATGTGGCACATCT1360.11007956486195539No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1360.11007956486195539No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTACGGTAGCAGACCTTTTTCTGTA1320.10684193060130963No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGTAGCAGGAAACATTGGAAA1310.10603252203614819No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT1300.10522311347098674No Hit
CATAGATCCCATACTCCTCCATTACCCTTACGGCAACATATCAGAAGCAT1250.10117607064517957No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT1250.10117607064517957No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTTGGTCTCATAGGGCACTGAGA1240.10036666208001813No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)