FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806495

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806495
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences172439
Sequences flagged as poor quality0
Sequence length150
%GC35

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC98265.698246916300837No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA80534.670057237631858No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA74934.345304716450455No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC69304.018812449619865No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA50772.944229553639258No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT49762.8856581167833264No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA48202.7951913430256496No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA45492.6380343193825064No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA35532.0604387638527246No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG30161.749024292648415No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT27311.5837484559757364No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG23541.3651204193946844No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC23261.3488827933356142No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA19681.1412731458660743No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC18751.0873410307413056No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT18691.0838615394429334No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG17741.0287695938853738No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA17471.013111883042699No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT17200.9974541722000244No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT16120.9348233288293252No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA15980.9267045157997901No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT15410.8936493484652543No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT14700.8524753681011836No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA12850.7451910530680415No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA12740.7388119856876925No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG12560.7283735117925759No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG11570.670961905369435No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC11440.6634230075562954No Hit
CATAGAGCACCCAACTATCCTTCAGCACACTGACGACAATGGGCACACTT11220.6506648727955973No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA10650.6176097054610615No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC10480.6077511467823404No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA8430.48886852742129105No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG8210.476110392660593No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA8190.4749505622278023No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACAGCCCAGTTTTCCTTCTCT8190.4749505622278023No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG7800.45233386878838316No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT7700.4465347166244295No Hit
CATAGATCTGGGAGGTGAAGAGGACAAGCACATTATTATTGGTTGGTTCT7540.43725607316210374No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG7530.43667615794570835No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG7480.4337765818637315No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC7440.4314569209981501No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT7190.416959040588266No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT7060.4094201427751263No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGAACAAGGGCATGGTCAAGTGT6970.404200905827568No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGCCCCTTCATTTTGCTGG6880.3989816688800097No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA6720.3897030254176839No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA6700.3885431949848932No Hit
CATAGATGCACCAGAAGCCACCTACCGTAAGGAATTAGAGCCAGTTCTGA6670.3868034493357071No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA6640.38506370368652104No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA6570.3810042971717535No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT6520.37810472108977666No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA6430.3728854841422184No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT6290.3647666711126833No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCACACTGACGACAAGGTTTTCC6190.3589675189487297No Hit
CATAGACAGAACACCACACCCCTGTCTACTTAGGAGTTCTGGCCCCTGTC6130.35548802765035753No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGAAGGGCAAGTGTATGGTCA6040.35026879070279926No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA6020.34910896027000854No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCACAGCCCAGTTTTCCTT6010.34852904505361315No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA5430.3148939625026821No Hit
CATAGACCATGTAATACCATCGTGAGCAGGAAAATGTCAGTGGGCCATCT5370.31141447120430993No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGCCAAGATTGTAGGAGTAGA5350.3102546407715192No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT5250.30445548860756555No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT5230.30329565817477483No Hit
CATAGACCCCCATGCAACCACATCTATGCCCCTTTACCTACCTTCTCAGC5130.2974965060108212No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA5130.2974965060108212No Hit
CATAGATGCCATAGACTTTAGGACAATAAGACGCTGACATCCCAACCACA5040.29227726906326296No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAACAAGGGCATGGTCAAGTGT4910.28473837125012325No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA4880.28299862560093714No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA4820.279519134302565No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA4720.2737199821386113No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCGGCCGCACTGAAATTGTCTA4440.2574823560795412No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT4380.254002864781169No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAAAATGTCAGTGGGCCAT4270.24762379740082002No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACATCGGCCGCACTGAAATT4200.24356439088605245No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGATAGGAAAATGTCAGTGGGCC4160.24124473002047098No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC4150.24066481480407562No Hit
CATAGATGTCCCCATTCATCCTGCAACTCCAGTCTCGGCAACAAGTCTAT4130.23950498437128492No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTGTCATAAAACAATGGGCACAC3880.22500710396140083No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC3810.22094769744663328No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTGGTGAAAAGTAGGGGACAGTTCT3800.22036778223023792No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT3750.21746820614826112No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG3740.21688829093186576No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT3700.21456863006628432No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTACCGTAAGGATGACTTATGGA3660.21224896920070285No Hit
CATAGACCCACTTACACACACAGGTTTGGGGGAAGAGAAACAGAATCTAT3620.20992930833512138No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTAGTCACTCAAATATAGACCTCA3620.20992930833512138No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGATGACTTATGGAATCTG3610.20934939311872605No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC3500.20297032573837703No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCATTGTGCCCTGTGATTGTCCT3440.19949083444000484No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGCTCCGTACTGGTGGTGCTGGA3420.19833100400721415No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGGAAAATGTCAGTGGGCCATC3380.1960113431416327No Hit
CATAGATCTGGGAGGTGAAGAGGACAATGGGCACACTTAACACCTCTATG3380.1960113431416327No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT3370.19543142792523732No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT3350.1942715974924466No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTCTCTTCCGCCTTTATCCTTCTAT3320.19253185184326052No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA3310.19195193662686513No Hit
CATAGATGCACCAGAAGCCACCTACCGTAACAAGCACATTATTATTGGTT3300.1913720214104698No Hit
CATAGACAGAACACCACACCCCTGTCTACACATAGACAGAACACCACAGC3270.1896322757612837No Hit
CATAGATCATGGGACTTCAGCATGGCTCTCTTCCGCCTTTATCCTTCTAT3250.18847244532849297No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT3190.1849929540301208No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACAAGCACATTATTATTGGT3070.17803397143337643No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACACCCGTAATCCCTCCCTT3030.175714310567795No Hit
CATAGAAAAGTCACCATGCAGCCCTGAGGTTCTTCAACACAGCTATTCTA2790.16179634537430626No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC2760.1600565997251202No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT2720.15773693885953874No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC2700.156577108426748No Hit
CATAGATGCACCAGAAGCCACCTACCGTAAGGGCAAGTGTATGGTCAGTT2700.156577108426748No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGCTAGGAAAATGTCAGTGGGCCA2680.1554172779939573No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAAGTATATGACACATTA2650.1536775323447712No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGATAGGAATTAGAGCCAGTTCT2610.15135787147918972No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGGAACAAGGGCA2530.14671854974802684No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCCTGTGATTGTCCTGGTCTATG2440.14149931280046857No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG2340.13570016063651494No Hit
CATAGATCATGAATGACTCCCACTCTGCTACCGTACATCGGCCGCACTGA2290.13280058455453814No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACCCCTTCATTTTGCTGG2290.13280058455453814No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA2110.1223621106594216No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTTCAGAAAGTCTAGGAAAATG2090.12120228022663086No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA2070.12004244979384013No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT2020.11714287371186333No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT1950.11308346719709579No Hit
CATAGAACTTGTGCTTTTGGTGTCACCACAGCCCAGTTTTCCTTCTCTAT1940.11250355198070042No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGCAAAAGGGTAAGAGTTCTATG1880.10902406068232826No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTGACATCCCAACCACACGTCTATG1860.10786423024953752No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG1850.10728431503314216No Hit
CATAGATGGCATGTCACTTCCTCAGATAGAATCACTTGATCATCCATTGT1790.10380482373476999No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGTGGTGCTGGAACTAGTTCTAT1770.10264499330197925No Hit
CATAGATTGCCTCATTGTGCCAGACACCACAGCCCAGTTTTCCTTCTCTA1750.10148516286918852No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG1750.10148516286918852No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGATGACTTATGGAATCTGA1740.10090524765279316No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)