FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806497

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806497
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102839
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4389842.68614047199992No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG34493.3537860150332075No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG24612.393060998259415No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA22102.148990169099272No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA21172.058557551123601No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA19651.9107537023891716No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC19241.8708855589805422No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG12841.24855356430926No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC12371.2028510584505878No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC10561.0268477912076157No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG9880.9607250167737921No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG8700.8459825552562744No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA5940.5776018825542839No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT5530.5377337391456549No Hit
CATAGATGTGCCTCTCCAACATTCATGCAAAGCTAGCATGTTGAGATGAA4980.4842520833535915No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA4620.4492459086533319No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGTTTTTCCAAATATAAG4580.44535633368663635No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT4230.4113225527280506No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC4170.40548819027800737No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA3790.3685372280944No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAATATAAGATCCCATCATCTC3580.34811695951924854No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA3490.3393654158441836No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGAGCATGTTGAGATGAATAATTG3450.3354758408774881No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC3360.3267242972024232No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT3330.3238071159774015No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGAGGGAAGGAAGGGCAAACTC3310.32186232849405383No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACGCCGTGGCTCACACCTGTAAT3030.2946353037271852No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCAG3000.2917181225021636No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGACGGAGTGAGGGCAGT2980.2897733350188158No Hit
CATAGATCATGGGACTTCAGCATGGCCATGGGACTTCAGCATGTTGAGAT2890.2810217913437509No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA2800.272270247668686No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT2700.26254631025194725No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGAGGGAA2590.25184997909353457No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2410.23434689174340476No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG2360.22948492303503537No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG2330.2265677418100137No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAGGGATTATCAGTAGTGCT2300.22365056058499208No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC2200.21392662316825328No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGAGGGAAGGAAGGGCA2190.21295422942657938No Hit
CATAGACCCTTCTCCATGCCACATCAGGGATTATCAGTAGTGCTCACATC2150.2090646544598839No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA2140.20809226071821No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA2090.2032302920098406No Hit
CATAGATCATGCAAAGAACACAGGCCCATAGAGCCATGGGTCCTTTTCAC2040.19836832330147125No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG2040.19836832330147125No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAGTTTTTCCAAATATAAGAT1990.19350635459310184No Hit
CATAGACCATTTGCCGCGTTCTGAAGTACGGTGTCAGAGATAGCACAGTG1980.19253396085142796No Hit
CATAGACCCTTCTCCATGCCACATCAGGCACAGTCATTGCTGCCGTCCAG1930.18767199214305857No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCAGCCATGGGTCCTTTTCACATCAT1910.18572720465971082No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA1890.18378241717636304No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1890.18378241717636304No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATTTCCCCTCTCTCTGAATAACTC1850.17989284220966753No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1810.17600326724297202No Hit
CATAGACTCAAGCAATCCTCCCACCTGTTCTACACATAGAGTCTCGCTAA1750.17016890479292873No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1750.17016890479292873No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC1700.16530693608455937No Hit
CATAGACACCTGGATCCTGTGTTGTCTACACTGACGACATGGTTCTACAC1650.16044496737619No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCAGGGTAGTTTTTCCAAATATAAGA1640.15947257363451608No Hit
CATAGACCCTTCTCCATGCCACATCATCTATGAGCCATGGGTCCTTTTCA1590.1546106049261467No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTAGTTTTTCCAAATATAAGA1530.1487762424761034No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1530.1487762424761034No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA1530.1487762424761034No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAATGGCATTAAATGACTTGCCCAA1500.1458590612510818No Hit
CATAGAAGATGGTCTGCTACACTGGTTAATAGTTTTTCCAAATATAAGAT1480.14391427376773402No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGCATGGTGACTCACACCTGTAAT1450.1409970925427124No Hit
CATAGACCCTTCTCCATGCCACATCATAGTCCTGGCATATACAAGGTGTC1440.14002469880103852No Hit
CATAGAGGGGCATGCTGGATAAATCTACACTGACGACATGGTTCTTATAG1410.13710751757601689No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1380.13419033635099523No Hit
CATAGACTCAAGCAATCCTCCCACCTATGGTTCTACACATAGAGTCTCGC1320.12835597390095196No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAAAGCGTAG1310.1273835801592781No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1300.1264111864176042No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1290.12543879267593033No Hit
CATAGATCATGGGACTTCAGCATGGCTAGTCCGTCACCCCTAATCTATGA1280.12446639893425646No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGAGGGATTATCAGTAGTGCTCA1280.12446639893425646No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGGAAAGCAATCACCGCCAGT1270.12349400519258258No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1260.1225216114509087No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT1150.11182528029249604No Hit
CATAGATGTGGCTATGCAGACTGAGTGGGGGCAGATTAACAGGTCATCTA1150.11182528029249604No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1150.11182528029249604No Hit
CATAGAAGGAGGGGAAACTGAGGCCACACTCATGCAAAGCTGGTCTATGA1150.11182528029249604No Hit
CATAGAGCTTCTGATCACTTTCGCCCACACTCATGCAAAGCTGGTCTATG1140.11085288655082216No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA1130.10988049280914829No Hit
CATAGAAGGAGGGGAAACTGAGGCCACACATAGAGGAGGGAAGGAAGGGC1110.10793570532580052No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGTGGTGGCTCACGCCTCTAAT1100.10696331158412664No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT1090.10599091784245276No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT1070.104046130359105No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG1030.1001565553924095No Hit
CATAGAAGGAGGGGAAACTGAGGCCATGGTTCTACACATAGAAGGAGGGG1030.1001565553924095No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)