FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806498

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806498
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102839
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4369242.4858273612151No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA42754.156983245655831No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG34873.390736977216815No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG26392.5661470842773655No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT19651.9107537023891716No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC18671.8154591157051314No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG12551.2203541458007177No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG12401.2057682396756095No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG9540.9276636295568802No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC5720.5562092202374586No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT5360.521203045537199No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTAGCTTTGCATGAATGTTG5200.5056447456704168No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACGGTAGCAAAGCTG4750.4618870272950923No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT4710.4579974523283968No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT4180.4064605840196812No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG4100.3986814340862902No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTA3710.36075807816100897No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC3680.3578408969359873No Hit
CATAGATGACCTGTTAATCTGCCCCCTTGGTCTCATAGAGATGATGGGAT3420.3325586596524665No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTCTTGGCCTCAGTTTCCCC3360.3267242972024232No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA3300.32088993475238No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT3190.31019360359396725No Hit
CATAGATGTGAGCACTACTGATAATCCCTGAGACTTGGTCTCATAGAGGG3180.3092212098522934No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA3130.304359241143924No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCTTGGCCTCAGTTTCCCCTCCTTC3100.3014420599189024No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA3050.29658009121053297No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAAGCTGCTATGGGA3040.29560769746885907No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC2930.28491136631044645No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG2860.2781046101187293No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCCGCCTCCCAAAGTGCTGGG2820.27421503515203377No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGAAGTCCCATGGCCATGC2800.272270247668686No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA2730.26546349147696885No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG2520.2450432229018174No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2430.2362916792267525No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG2330.2265677418100137No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTTTTAAAATGAGCACCT2310.22462295432666596No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAGAGACTTGGCCTCAGTTTCCCCT2200.21392662316825328No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT2100.2042026857515145No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC2090.2032302920098406No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA2070.20128550452649285No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG2050.1993407170431451No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG2050.1993407170431451No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA2020.19642353581812347No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTTGAGGTAAAACTAT2010.19545114207644962No Hit
CATAGATCCACTGTGCTATCTCTGACACCGTACTTCAGAACGCGGCAAAT1990.19350635459310184No Hit
CATAGATGATGTGAAAAGGACCCATGGCTCTATGGGCCTGTGTTCTTTGC1990.19350635459310184No Hit
CATAGATGATGTGAAAAGGACCCATGGCTGAGAGAAAACTACCCCAGGCT1980.19253396085142796No Hit
CATAGACACACCCAACTCTGCTCAGTGGGCAGGGGTCAGGGGTGGGGGGC1950.18961677962640633No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1920.1866995984013847No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA1890.18378241717636304No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGAGAAAACTACCCCAGGCTC1860.18086523595134144No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1780.1730860860179504No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA1770.17211369227627651No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1760.17114129853460264No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACCCTGAGAGAAAAC1650.16044496737619No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1610.15655539240949445No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA1590.1546106049261467No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1550.1507210299594512No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTAGACTTGGCCTCAGT1540.1497486362177773No Hit
CATAGATGATGTGAAAAGGACCCATGGCTCATAGATGATGTGGCATGGAG1520.14780384873442953No Hit
CATAGATGACCTGTTAATCTGCCCCCAGATCACAGAGTGGCCTTGGGCAA1490.1448866675094079No Hit
CATAGAGTGGGGGACTAGCATTGATTCTATGTGTAGAACCATGTCGTCAG1470.14294188002606015No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTATGTGTAGAACCATGTCGTC1470.14294188002606015No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAACCAGTGTAGC1470.14294188002606015No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGG1450.1409970925427124No Hit
CATAGACACCTTGTATATGCCAGGACTATGATGTGGCATGGAGAAGGGTC1390.13516273009266913No Hit
CATAGACCTGACCTCATGATCTGCCTGACTCAGCCTCCTGAAGTGCTGGG1390.13516273009266913No Hit
CATAGAGGGGAGACACTGGCTATAAGAACCATGTCGTCAGTGTAGATTTA1370.13321794260932135No Hit
CATAGATTAGGGGTGACGGACTAGCCATGCTGAAGTCCCATGATCTATGT1330.12932836764262584No Hit
CATAGAGGGGAGACACTGGCTATAAGAACAGAGACTTGGTCTCATAGAGG1300.1264111864176042No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1280.12446639893425646No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGG1280.12446639893425646No Hit
CATAGATGTGAGCACTACTGATAATCCCTCCTTGGCCTCAGTTTCCCCTC1250.12154921770923482No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG1230.11960443022588707No Hit
CATAGACTGGCGGTGATTGCTTTCCTACTTGGCCTCAGTTTCCCCTCCTT1230.11960443022588707No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1210.1176596427425393No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCCCTTGCCCTGTGGCCCTGGCT1200.11668724900086543No Hit
CATAGACCAGCTTTGCATGAGTGTGGGCGAAAGTGATCAGAAGCTCTATG1160.11279767403416992No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA1150.11182528029249604No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG1130.10988049280914829No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCAGCCTCCCAGATTGCTGGG1130.10988049280914829No Hit
CATAGATGACCTGTTAATCTGCCCCCACTCAGTCTGCATAGCCACATCTA1120.1089080990674744No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT1080.1050185241007789No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT1070.104046130359105No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTCAGTTTCCCCTCCTTCTATGT1030.1001565553924095No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)