FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806503

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806503
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences377465
Sequences flagged as poor quality0
Sequence length150
%GC44

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG7752220.537533281231372No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG248806.591339594399481No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG166054.399083358722001No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA148643.93784854224895No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG130503.457274184361464No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC127353.3738227385320494No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC110682.93219238869829No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG96932.5679202045222738No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA57841.5323275005629662No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC54381.4406633727630376No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG50931.3492641701879644No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA44861.1884545587008066No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA41221.092021776853483No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT34400.9113427735021791No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT32140.8514696726848847No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA32080.849880121335753No Hit
CATAGAACTTTGTGCCCCCAGTGTCTATGAGAGGAAAGCAATCACCGCCA28260.7486786854410342No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT24800.6570145576411058No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA24260.6427085954989203No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGGAGGGAAGGAAGGGC23240.6156862225636814No Hit
CATAGACCCTTCTCCATGCCACATCAGTGTAGCATGTTGAGATGAATAAT23080.6114474189659969No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC22760.6029698117706277No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA22540.5971414568238115No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGGAGGGAAGGAAGGGCAAAC22450.5947571298001139No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA21020.5568728226458083No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGCTAGTCCGTCACCCCTAATC20820.5515743181487025No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA19150.5073318055978701No Hit
CATAGAAGATGGTCTGCTACACTGGTGTTCCACACTCATGCAAAGCTGGT18850.49938404885221144No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATTTCCCCTCTCTCTGAATAACTC18510.4903765912071318No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA18220.48269375968632855No Hit
CATAGAAGATGGTCTGCTACACTGGTACATGCCATGTCTTCTGTGTTTGG17420.4614997416979058No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA15420.40851469672684887No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC14880.3942087345846635No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT14690.3891751553124131No Hit
CATAGACCCTTCTCCATGCCACATCATAGCATGTTGAGATGAATAATTGA14390.3812273985667546No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG14310.3791079967679123No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA14310.3791079967679123No Hit
CATAGATCACCCAGGTAATCACTAGGTTACGGGGGCAGATTAACAGGTCA14170.37539904361993826No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCGGCTAGGCTAGTCCGTCACC14120.37407441749566184No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGTGCAGCTATATTGGAGGA13760.3645371094008716No Hit
CATAGACACCTGGATCCTGTGTTGTCTCTTAGGTAGAGGAGTTTCAAACA13300.3523505490575285No Hit
CATAGAAGATCCCATAGCAGCTTTGCCAGTTTTTCCAAATATAAGATCCC13070.34625726888585695No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTAGGAAAGCAATCACCGCCA12780.3385744373650537No Hit
CATAGACACCTGGATCCTGTGTTGTCTTAGGTAGAGGAGTTTCAAACATC12620.33433563376736913No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC12560.33274608241823744No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC12220.3237386247731578No Hit
CATAGATGTGCCTCTCCAACATTCACCAAGTCACCCAGCCTCTATGAGAC11260.29830580318705047No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGGAGGGAAGGA10470.277376710423483No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCAGTTTTTCCAAATATAAGAT10310.2731379068257984No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGAGACAGCCGCTCACCTCTA9530.2524737392870862No Hit
CATAGAAGATCCCATAGCAGCTTTGCTAATAGTTTTTCCAAATATAAGAT8410.22280211410329434No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG8400.22253718887843907No Hit
CATAGACCCTTCTCCATGCCACATCAGCATGTTGAGATGAATAATTGAGA8200.21723868438133337No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT7800.206641675387122No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG7460.19763421774204232No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT7440.19710436729233174No Hit
CATAGAGCTTCTGATCACTTTCGCCCTAGAGTCTCGCTAATAGTTTTTCC7340.19445511504377888No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCATCTATGAGACCAAGTCTC7060.18703720874783092No Hit
CATAGATCACCCAGGTAATCACTAGGTTGACGACATGGTTCTACACATAG6540.1732610970553561No Hit
CATAGACCCTTCTCCATGCCACATCATGCAAAGCTGGTCTATGAGACCAA6530.17299617183050084No Hit
CATAGATCACCTACACAGACAGCTTTCCGATCTAGTCCTGGCATATACAA6400.16955214390738213No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACTTCTTATAGC6250.16557826553455288No Hit
CATAGAGCTTCGGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG6070.16080961148715775No Hit
CATAGAGGGGCATGCTGGATAAATCTGGTCTCATTTCCCCTCTCTCTGAA5820.15418648086577563No Hit
CATAGATGTGGCTATGCAGACTGAGTACACTGAGCAGAGTTGGGTGTGTC5820.15418648086577563No Hit
CATAGATCACCTACACAGACAGCTTTCCACACTGAGCATGTGACCAAACA5780.15312677996635451No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTCTCCAGAACCCACCATCTATGA5500.14570887367040652No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCTACCGTAGACGGAGTGAGGGCAGT5300.14041036917330085No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTACTGACAAG5030.13325738810220816No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA4910.13007828540394473No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTGTCAGAGATAGCACAGTGG4890.12954843495423415No Hit
CATAGAGCTTCCGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG4610.1221305286582862No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT4600.1218656034334309No Hit
CATAGATGTGGCTATGCAGACTGAGTGGGGGCAGATTAACAGGTCATCTA4590.12160067820857563No Hit
CATAGATGTGGCTATGCAGACTGAGTCGGCTAGTCCGTCACCCCTAATCT4320.11444769713748294No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT4270.11312307101320651No Hit
CATAGACTCAAGCAATCCTCCCACCTACACTGACGCCATGGGTCCTTTTC4030.1067648656166797No Hit
CATAGATTAAGTGCAGCTATATTGGAGGAAAAGTCTATGAGACCAAGTCT4000.10597008994211385No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATAA3980.10544023949240328No Hit
CATAGACCATTTGCCGCGTTCTGAAGGCAGATCATGAGGTCAGGTCTATG3960.1049103890426927No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG3930.10411561336812684No Hit
CATAGATGTGGCTATGCAGACTGAGTCTCTGCTACCGTAAGTGCAGCTAT3900.103320837693561No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGCG3880.10279098724385043No Hit
CATAGATGTGGCTATGCAGACTGAGTGTGGCTAGTCCGTCACCCCTAATC3840.1017312863444293No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)