FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806506

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806506
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences104209
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG69666.684643360938115No Hit
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT62035.95246091988216No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG56765.446746442245871No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG51534.944870404667543No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG48194.624360659827846No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC39993.8374804479459548No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC33543.2185319885998327No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG31363.009337005440989No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA24342.3356907752689304No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT23732.2771545643850337No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT23512.2560431440662514No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA23482.253164314022781No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG19791.89906821867593No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA15171.4557283919814987No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT14621.4029498411845425No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT12201.1707242176779356No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC11021.0574902359681024No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT9610.922185223924997No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT9590.9202660038960166No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA9240.8866796533888628No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC8150.7820821618094406No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG8090.7763245017224999No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG7750.7436977612298362No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT7690.7379401011428954No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG7680.7369804911284054No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTACCCTGGGAGAAGAAATGTTG7620.7312228310414648No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA7190.68995960041839No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT7000.6717270101430779No Hit
CATAGATGGGACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGCAACT6560.6295041695055129No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA5890.5652102985346754No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT5840.560412248462225No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC5720.5488969282883436No Hit
CATAGACCTCCCATGGTTCCTGATGATGATGGGAGTGTCTGCTGGTCTAT5570.534502778070992No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT5520.5297047279985414No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTACACTGTCAGACCCAGGCTACAC5340.5124317477377194No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG4460.4279860664625896No Hit
CATAGAATCTGGTTCAAGCACACAGTGTTGGTGCTGGAATAGTTGGACTC4370.4193495763321786No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT4290.41167269621625774No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT4260.4087938661727874No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG4250.4078342561582972No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTACGAATGAGGAAACAGGCACT4220.40495542611482693No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT4110.3943997159554357No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGACCAACATGCTTTTAGTCA3490.3349038950570488No Hit
CATAGACCCCATGACTCAGCTCCTCAATCCTGTGTTCATGGCTTCTATGT3440.3301058449845983No Hit
CATAGACCAGTTACCACAAGAAGCAATGACACTGACGAATGAGGAAACAG3430.32914623497010814No Hit
CATAGATCTAGCCCATCACTTCAGCACCAGCCCGTTCTCTCTGTTGTGTC3280.31475208475275646No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGACCATGGAGAGAATA3270.3137924747382664No Hit
CATAGAACACGAAGATTTCAGATTAGCCTAACACGCACAAAGGCACTGTC3250.3118732547092861No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG3180.30515598460785537No Hit
CATAGACCCCATGACTCAGCTCCTCACCAACATGCTTTTAGTCACGTCTA3180.30515598460785537No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG3090.29651949447744436No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG3090.29651949447744436No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTTGTTGTCTTTATGGTGT3040.2917214444049938No Hit
CATAGATGGGACAGCGACAATGACAGTCATGATGGGAGTGTCTGCTGGTC2900.27828690420213226No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGCAGGCCCTTCAGC2680.2571754838833498No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGTAAAGGCTGGGGTCT2670.2562158738688597No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA2620.25141782379640915No Hit
CATAGATGGGACAGCGACAATGACAGGGTCCTAAATGTCTTTGTCCTTCT2610.250458213781919No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC2580.24757938373844868No Hit
CATAGAACATTGATTCCTGGCATGTCCACAGGGTCCTAAATGTCTTTGTC2530.24278133366599816No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCACATAGACCAACATGCTTTTAG2520.24182172365150803No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC2390.22934679346313658No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG2330.22358913337619593No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTTGTTGATGTTCGCACCC2320.2226295233617058No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT2250.21591225326027505No Hit
CATAGAGCAACAATGAAGGTGCACAAACACTGACGAATGAGGAAACAGGC2220.21303342321680468No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGATGGGAGTGTCTGC2210.21207381320231458No Hit
CATAGATCTAGCCCATCACTTCAGCATGGGTCATTGTGAGGATTAAATGT2120.20343732307190357No Hit
CATAGATGGCAAATGGTGGGATCTCTGAGACCAAGTAGCCCGTTCTCTCT2060.1976796629849629No Hit
CATAGAGGTGAGCGGCTGTCTCCAGACATGGGTCATTGTGAGGATTAAAT2010.19288161291251238No Hit
CATAGAACACGAAGATTTCAGATTAGCCTGATGCCTGGCCAACTGTTTTT1900.18232590275312113No Hit
CATAGATCTAGCCCATCACTTCAGCAACATAGACCATGGAGAGAATAATC1900.18232590275312113No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG1830.17560863265169036No Hit
CATAGATTCAGAGAAGGACAGCGTGGGACTTGGTCTGAGAAAAGATGCAG1820.17464902263720022No Hit
CATAGACCAGTTACCACAAGAAGCAATGTTCGGTGGGTTGAGGGAGTCTT1750.16793175253576947No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGACTGTTAATATAGAAG1750.16793175253576947No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGAGCATGCCTTTGA1740.16697214252127934No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGGCAGGCCC1600.1535376023184178No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGACTGTTAATATAGAA1520.1458607222024969No Hit
CATAGACCAGTACGCCTTACCCCTTGTGAATGGTGGGTTGAGGGAGTCTT1510.1449011121880068No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGCTGGAATAGTTGGACTCTATGT1490.14298189215902657No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTAGCCCGTTCTCTCTGT1430.1372242320720859No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACCATGGAGAGAATAATCCGTCTA1420.1362646220575958No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTACCCTGGGAGAAGAAA1420.1362646220575958No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG1340.1285877419416749No Hit
CATAGACCTCCCATGGTTCCTGATGACCTCCCATGATTTACCATCACAAA1330.12762813192718478No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCATTGTAGATTTCTTTC1320.12666852191269468No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGTCGTCAGATGAGCA1250.1199512518112639No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT1240.1189916417967738No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG1200.11515320173881335No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT1190.11419359172432322No Hit
CATAGATCTAGCCCATCACTTCAGCATACGGTAGCCATGCTGAAGTCCCA1190.11419359172432322No Hit
CATAGATGGGACAGCGACAATGACAGAGCTGTTACAAAAATTGGGAAGCG1090.10459749157942211No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGCTAATAAAGACATGCCTGG1080.10363788156493202No Hit
CATAGAAGGAACAGCAGAGAGGGCAGAGAAGTCTATGTGTAGAACCATGT1080.10363788156493202No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAACTGTTTTTTCTATGTGTAG1050.10075905152146167No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)