FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806512

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806512
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64816
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1475222.759812392001972No Hit
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT57138.81418168353493No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG47517.329980251789682No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG39806.140459145889904No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG34575.333559614909899No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC18412.8403480622068624No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG16192.4978400394964204No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG14532.2417304369291533No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT12661.9532214268081955No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC10021.5459145889903727No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA8671.337632683288077No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT7241.1170081461367565No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT7011.0815230807208098No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT5870.9056405825722045No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG5660.8732411750185138No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA5280.8146136756356455No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT4990.7698716366329301No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT4150.6402740064181683No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA3910.6032461120710936No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG3630.5600469019995064No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG3430.5291903233769439No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT3300.5091335472722784No Hit
CATAGAGGCTGCAGTGAACAATGATCGTAAAGGCTGGGGTCTTGGGTCTA2960.4566773636139225No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT2210.3409651937793137No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC2210.3409651937793137No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG2190.3378795359170575No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT1880.2900518390520859No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA1780.2746235497408048No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTGACAGTTGTGGAAAGTGCAATGA1720.265366576154036No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC1600.24685262898049865No Hit
CATAGACCAGTACGCCTTACCCCTTGACACTGACGAATGAGGAAACAGGC1550.23913848432485807No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC1500.2314243396692175No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGTCGTCAGTGTGGTG1490.22988151073808938No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTGGGTTGAGGGAGTCTTCTCTATG1450.22371019501357692No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGCTGGAATAGTTGGACTCTATGT1400.2159960503579363No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCATGTCGTCAGTGTGGT1350.2082819057022957No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT1290.19902493211552702No Hit
CATAGATCTCCTCTCTGTAATGCACCAGTGTGTAAAGGCTGGGGTCTTGG1280.1974821031843989No Hit
CATAGACCAGTACGCCTTACCCCTTGATGGTGGGTTGAGGGAGTCTTCTC1250.19285361639101456No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT1190.18359664280424587No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGGGCTGGTGTTTTCCTTGATCT1060.16353986669958034No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGTGGGTTGAGGGAGTC1040.1604542088373241No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT1010.15582572204393977No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC960.1481115773882992No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTGTAAAGGCTGGGGTCT880.13576894593927427No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG860.132683288077018No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGGCAGGCCCTTC840.12959763021476178No Hit
CATAGATCTAGCCCATCACTTCAGCACACTGACGAATGAGGAAACAGGCA800.12342631449024932No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA780.12034065662799309No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT780.12034065662799309No Hit
CATAGAACACGAAGATTTCAGATTAGCCTACATTGACGACATGTGCTCGT760.11725499876573686No Hit
CATAGATGGGACAGCGACAATGACAGTGTGTTACAAAAATTGGGAAGCGG730.11262651197235252No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTATGGGTCATTGTGAGGATTAAAT700.10799802517896814No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGGGTCATTGTGAGGA650.10028388052332757No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)