FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806514

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806514
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences100387
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1870818.635879147698407No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT45684.5503899907358525No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA30473.0352535686891726No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT27292.71847948439539No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA25632.5531194278143583No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA24942.4843854283921227No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG23102.30109476326616No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG18631.8558179844003704No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT15371.5310747407532848No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA13321.3268650323249027No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA12801.275065496528435No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC12451.2402004243577356No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG12261.2212736708936416No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA11931.1884008885612678No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT11061.1017362805941007No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT10521.0479444549593075No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA9720.9682528614262803No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA9510.9473338181238607No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA8440.8407463117734368No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG7580.7550778487254326No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT6770.6743901102732426No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT6680.665424806000777No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT6580.6554633568091486No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA6360.6335481685875661No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA6250.6225905744767749No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT5330.5309452419137937No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG5160.5140107782880253No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA5060.5040493290963969No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC4580.4562343729765806No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT4530.4512536483807664No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC4350.43332303983583526No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA4130.4114078516142528No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC4130.4114078516142528No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT3980.39646567782681025No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT3870.385508083716019No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT3810.37953121420104197No Hit
CATAGACACACTGACAATTTGCACCTGTGTCCATCCAGTCCAGCTCCTTC3690.3675774751710879No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT3530.35163915646448246No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT3380.33669698267703985No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC3360.3347046928387142No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGCCCCAGGTAGCAAAAC3250.32374709872792296No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG3220.32075866397043445No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG2880.28688973671889784No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2820.28091286720392084No Hit
CATAGACCACACACACAACTGAGAGTGTGCAGGGCAGAGAGTGTGTTGTA2790.27792443244643233No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG2640.2629822586589897No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2430.24206321535657008No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT2420.24106707043740722No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA2370.23608634584159302No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT2330.23210176616494166No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2320.23110562124577885No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG2320.23110562124577885No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA2300.22911333140745316No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG2080.20719814318587068No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGGGAAAGGTATGTGGCAC2030.20221741859005649No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGCAACATATCAGAAGCATCTA2030.20221741859005649No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA2020.20122127367089362No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA2000.19922898383256796No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTGCTCCTTCTCACACAAA1990.19823283891340512No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1990.19823283891340512No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTTCTGTTTACTCGGAGATTTGA1970.19624054907507946No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGATAGCGAGAAGAGTGGAG1950.19424825923675376No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT1940.19325211431759093No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGAAGTGTATTAAT1930.19225596939842807No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTTCAGCTCTTTGAGGCATCTAT1920.19125982447926523No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT1920.19125982447926523No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGGGAAAGGTATGTGGCA1900.18926753464093957No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1900.18926753464093957No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTGGGAAAGGTATGTG1880.18727524480261387No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA1860.1852829549642882No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT1760.1753215057726598No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGCAACATATCAGAA1760.1753215057726598No Hit
CATAGAAACAGCAAAGCCCTCCACCAGATCCCCAGGTAGCAAAACAGAGT1730.17233307101517129No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCATCCAGTCCAT1720.17133692609600845No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1690.16834849133851992No Hit
CATAGACCATCCCTTCTACAAGAGGCATCAATCAGGTTCTCATTCTCAGC1670.16635620150019426No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA1670.16635620150019426No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGTGTAGAACCATGT1630.1623716218235429No Hit
CATAGAGTCCTTCCCTCTCACACATGTCACTGAGCTGAGGGTCACTTCTA1600.15938318706605437No Hit
CATAGAGGCACGATCTTGTTTCACTGTACGATAGCGAGAAGAGTGGAGGC1580.15739089722772867No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT1560.155398607389403No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAATGGCTTCCA1530.1524101726319145No Hit
CATAGACACACTGACAATTTGCACCTGTCCTCTGTTTACTCGGAGATTTG1530.1524101726319145No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG1500.14942173787442597No Hit
CATAGAGCAGCATTCTCTCAGGGCTGTTCTCTATGTGTAGAACCATGTCG1450.14444101327861178No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGGGAAAGGTATGTGGCACA1430.14244872344028608No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAATCTTTGGGAGGCTATTAG1410.14045643360196042No Hit
CATAGATATTCTGCCCCCTCCTCTCCACACGGAAGACACAGCACACTCTT1400.13946028868279756No Hit
CATAGAGGCACAGGGATAATGAGGGAGATCTAGGAGGAGCTGACTTACTG1390.13846414376363472No Hit
CATAGACCATCCCTTCTACAAGAGGCATCTGGTGATCAGGAATCTTTGGG1360.13547570900614622No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATAGGAGGAGCTGACT1350.13447956408698336No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGGCAT1340.13348341916782056No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1330.1324872742486577No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT1330.1324872742486577No Hit
CATAGAGTCCTTCCCTCTCACACATGTATATCTAGGAGTAGAACTGCTGG1300.1294988394911692No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCACTAAAGCCCCAGGTAGCAAA1280.1275065496528435No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTAGAGGAGAATGATATTGTT1270.12651040473368066No Hit
CATAGAGTCCTTCCCTCTCACACATGTGTGCTATGAAGCAGAGGTAGATG1260.12551425981451783No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTAGGAATCTTTGGGAGGCTATT1230.12252582505702929No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGGCAACATATCAGAAGCA1230.12252582505702929No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAGAACCATGTCGTCAG1190.11854124538037793No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAACTTGGTCTCATAGAGGAGAATG1170.11654895554205225No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1170.11654895554205225No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTTTCCCCAGGTAGCAAAACAG1160.11555281062288943No Hit
CATAGATATTCTGCCCCCTCCTCTCCTCTTTCCCCAGGTAGCAAAACAGA1150.11455666570372658No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGGGGAAAAGGGATAGGAGG1120.11156823094623806No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCCATGCTGAAGTCCCATGA1110.11057208602707522No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTACGGCAACATATCAGAAGCATCT1080.1075836512695867No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1070.10658750635042386No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGAGTTTCTAGCAC1050.10459521651209817No Hit
CATAGATCACCAGATGCCAGTTGTGCGTGTGGTCACTGACAGGTCTTAAA1040.10359907159293534No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT1030.1026029266737725No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTCCATTGGTCTATATCTCT1030.1026029266737725No Hit
CATAGACCATCCCTTCTACAAGAGGCATCCTCTGGGTGTGTCCTCCCGGA1020.10160678175460966No Hit
CATAGAAGTACCATCAGAGTGAACAGGCAACCTACAGAATGGGAGAAAAT1020.10160678175460966No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGGAGCTGACTTACTGTTCTATG1020.10160678175460966No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATTGCATTCTCTCAGGGCT1010.10061063683544681No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)