FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806523

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806523
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56272
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2688247.77153824282059No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG15422.740261586579471No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA11902.1147284617571795No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA11672.073855558714814No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG11151.9814472561842478No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG10031.7824139891953368No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC8261.4678703440432186No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC7781.3825703724765426No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA7461.325703724765425No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC5881.0449246516917827No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG4900.8707705430764856No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTA3380.6006539664486779No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG3030.5384560705146432No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGAGGGAA2510.4460477679840773No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAACTGACGACATGGTTCTACA2410.4282769405743531No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATAGATCATGGGACTTCAG2290.40695194768268406No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA2140.3802957065680978No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC2010.35719363093545636No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA1720.3056582314472562No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA1710.3038811487062838No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT1690.30032698322433893No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA1680.2985499004833665No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1680.2985499004833665No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1610.28611032129655956No Hit
CATAGAGAGGTCGCCCAGGTATTTCTACTACCATGGGTCCTTTTCACATC1590.28255615581461474No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA1470.2612311629229457No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1440.25589991470002843No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1390.2470145009951663No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT1340.23812908729030421No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1300.23102075632641458No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA1290.22924367358544215No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1180.20969576343474552No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA1170.2079186806937731No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTATGAGACCAAGTCTTGCT1170.2079186806937731No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAAGTGCAGCTATATTGGAGGAAAA1170.2079186806937731No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1160.20614159795280068No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA1130.20081034972988343No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC1080.1919249360250213No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT1070.1901478532840489No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGTGCAGCTATATTGGAGGA1050.18659368780210409No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1050.18659368780210409No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1020.1812624395791868No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAACACATAGAGTCTCGCTAAT1010.17948535683821437No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTACCAAGAAG990.17593119135626956No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT980.17415410861529715No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTATGTCAGAG980.17415410861529715No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT970.1723770258743247No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTACCATGGGT960.17059994313335228No Hit
CATAGATCATGGGACTTCAGCATGGCCCTCTATGTGTAGAACCAAGTTTT940.16704577765140746No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA900.15993744668751775No Hit
CATAGAGAGGTCGCCCAGGTATTTCTTAGGTAGAGGAGTTTCAAACATCT900.15993744668751775No Hit
CATAGAACACAGATCTGCTTGGAGGTACACTGAGCAGAGTTGGGTGTGTC890.15816036394654534No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG860.1528291157236281No Hit
CATAGATGTGCCTCTCCAACATTCATGCAAAGGGGGGCAGATTAACAGGT840.14927495024168325No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC830.14749786750071084No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA810.143943702018766No Hit
CATAGACCCTTCTCCATGCCACATCATCCATGGGTCCTTTTCACATCATC790.14038953653682115No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG760.1350582883139039No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG750.13328120557293147No Hit
CATAGATCACCTACACAGACAGCTTTCCTACGGGGGCAGATTAACAGGTC720.12794995735001422No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG700.12439579186806937No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG680.12084162638612454No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA680.12084162638612454No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAATAGTTTTTCCAAATATAAG670.11906454364515211No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCATAGATCTTAGGTAGAGGAG650.11551037816320729No Hit
CATAGAAGATGGTCTGCTACACTGGTGTTCCACACTCATGCAAAGCTGGT650.11551037816320729No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA640.11373329542223486No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT640.11373329542223486No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC620.11017912994029003No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACGCCGTGGCTCACACCTGTAAT610.1084020471993176No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGCTAGTCCGTCACCCCTAATC580.10307079897640034No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGAGGGAAGGAAGGGCAAACTCT580.10307079897640034No Hit
CATAGAGCTTCTGATCACTTTCGCCCACACTGACCATGGGTCCTTTTCAC580.10307079897640034No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)