FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806526

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806526
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences117662
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1357311.53558498070745No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG91937.8130577416668086No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG77056.548418350869439No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG69835.934796280872329No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG47053.9987421597457122No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA46903.985993778790094No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG37173.1590488008022977No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT35373.0060682293348746No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC31852.7069062229096907No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC30072.5556254355696826No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT28292.404344648229675No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA26772.2751610545460728No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT20671.7567268956842481No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA20551.7465281909197532No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC14741.252740901905458No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT14001.1898488891910728No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC12241.0402678859784809No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT11981.018170692322075No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG11540.980775441518927No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT9190.7810508065475684No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG9130.7759514541653211No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT9070.7708521017830735No Hit
CATAGACCCCATGACTCAGCTCCTCAATCCTGTGTTCATGGCTTCTATGT8600.7309071747888018No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG7390.6280702350801448No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC7170.6093726096785709No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT6960.5915248763407047No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA6840.5813261715762098No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGTGCTCGTATCTTGG6030.5124849144158692No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG5770.4903877207594635No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG5400.4589417144022709No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT5130.4359946286821573No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTTGGGCTGGTGTTTTCCT5030.42749570804507825No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTAGCCCGTTCTCTCTGT5020.42664581598137036No Hit
CATAGATCTAGCCCATCACTTCAGCATCATACCCTGGGAGAAGAAATGTT5010.4257959239176624No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT4880.4147473270894596No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT4690.39859937787900934No Hit
CATAGATTCAGAGAAGGACAGCGTGGTCACATAGGTTGCTAGACAGATTT4450.37820196835001957No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACAGTTGTGGAAAGTG4410.3748024000951879No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC4190.3561047746936139No Hit
CATAGATCTAGCCCATCACTTCAGCATGGTGCTGGAATAGTTGGACTCTA3910.33230779690979245No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG3660.31106049531709473No Hit
CATAGACCAGTACGCCTTACCCCTTGCTGGGTCCTAAATGTCTTTGTCCT3530.3000118984888919No Hit
CATAGATCTAGCCCATCACTTCAGCATTCACTCTCCCACCATTCAGACTC3500.2974622222977682No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTACAGTTGTGGAAAGTGCAA3410.289813193724397No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGCAGGCCCT3310.28131427308731793No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTACGAATGAGGAAACAGGCACT3280.2787645968961942No Hit
CATAGACCCTCTCTTACCCTTCCACCCCTGGGTCCTAAATGTCTTTGTCC3220.27366524451394675No Hit
CATAGATCTAGCCCATCACTTCAGCATGATGGGAGTGTCTGCTGGTCTAT3220.27366524451394675No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGGTGCTGGAATAGTTG3170.2694157841954072No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACGAATGAGGAAACAG3160.2685658921316993No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGTGCTCGTATCTTG3130.2660162159405755No Hit
CATAGAATCTGGTTCAAGCACACAGTGTACAGTTGTGGAAAGTGCAATGA3110.2643164318131597No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC3100.26346653974945183No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGTAAAGGCTGGGGTCTT3090.2626166476857439No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGTGGGTTGAGGGAGTC3040.2583671873672044No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAACTGGCTTGATTGCAC2990.2541177270486648No Hit
CATAGATTCTTTCCTGGCTGTGGGTGTGGTGCTGGAATAGTTGGACTCTA2930.24901837466641735No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGGGTCATTGTGAGG2720.23117064132855128No Hit
CATAGATGGCCCAGAATCCTTTGTAGACCATGGAGAGAATAATCCGTCTA2710.23032074926484336No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG2580.21927215243664055No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTGTTGATGTTCGCACCC2470.20992333973585356No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT2400.20397409528989818No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACCTCCATGAGCATG2390.20312420322619026No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGGTCCTAAATGTCTTT2370.20142441909877443No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT2350.19972463497135864No Hit
CATAGACCAGTTACCACAAGAAGCAATGTGGGTCCTAAATGTCTTTGTCC2340.19887474290765073No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACCATGGAGAGAATAATCCGTCTA2270.19292549846169535No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT2220.1886760381431558No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGGTGCGATGGCTTTCTGACT2040.17337798099641347No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT2020.17167819686899766No Hit
CATAGACCAGTTACCACAAGAAGCAATGCCTGGCCAACTGTTTTTTCTAT2020.17167819686899766No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGAGCATGCCTTTGA1960.1665788444867502No Hit
CATAGAGCAGCTTGAATTCTCCTCAGATACGGTTATAGAAAACAAGGAGA1770.1504308952762999No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTTGTTACAAAAATTGGGA1750.1487311111488841No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC1740.14788121908517618No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG1540.130883377811018No Hit
CATAGAACATTGATTCCTGGCATGTCCGTCAGTGTAGCCCGTTCTCTCTG1500.12748380955618638No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTATGAGCAT1440.12238445717393891No Hit
CATAGATGACATGGGAAATTATGCTGCTCATGTGCTCGTATCTTGGCCAT1310.1113358603457361No Hit
CATAGAACTTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG1290.10963607621832028No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCATGGAGAGAATAATCCGTC1280.10878618415461237No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGACAGTTGTGGAAAGTGCAAT1210.102836939708657No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTTACAAAAATTGGGAAGCGGT1200.10198704764494909No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)