FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806535

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806535
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences147204
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA127778.67979131001875No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG85385.800114127333496No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC84885.766147659031005No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG67074.556262058096247No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG56273.822586342762425No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC52013.533192032825195No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG49713.3769462786337328No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA47623.2349664411293175No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA34692.3565935708268797No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG34032.3117578326675905No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT30582.0773892013803974No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA30502.0719545664519985No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA27201.8477758756555527No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT26011.7669356810956223No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA24561.6684329230183963No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA23821.6181625499307084No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC20651.4028151408929106No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC18431.252004021629847No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG17541.1915437080514117No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT15831.0753783864568898No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA14941.0149180728784544No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT14210.9653270291568163No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT13400.9103013505067796No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT12660.8600309774190918No Hit
CATAGAAGCCATGAACACAGGATTGATAGGCTTAGAGGGCTTGCTCTATG10590.7194097986467759No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA10310.7003885763973805No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT9380.6372109453547459No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT8260.5611260563571643No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT7720.5244422705904731No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG7580.5149316594657753No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC7360.499986413412679No Hit
CATAGATCAAGGAAAACACCAGCCCAACACTGACGATCATTGTTCACTGC6910.46941659194043645No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA6150.41778756012064894No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA6060.41167359582620033No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG5960.40488030216570203No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG5800.3940110323089046No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG5200.3532512703459145No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC5080.34509931795331644No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCCCTCTCTGCTGTTCCTTCT4900.33287138936441946No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG4800.3260780957039211No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGCTTCTTGTGGTAACTGGTC4710.31996413140947255No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA4590.3118121790168745No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT4410.2995842504279775No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT4220.28667699247303063No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGGTGCATTACAGAGAG4010.2724110757859841No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG3760.2554278416347382No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA3740.2540691829026385No Hit
CATAGACGGATTATTCTCTCCATGGTCTCAAACTGCTGGGGTTGCTCTAT3700.2513518654384392No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT3680.2499932067063395No Hit
CATAGAGTGCCTGTTTCCTCATTCGTTGGTCTACCAGTTATTAGTTGAAT3550.24116192494769165No Hit
CATAGACCAGCAGACACTCCCATCATTGCTTCTTGTGGTAACTGGTCTAT3500.23776527811744247No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT3450.2343686312871933No Hit
CATAGAAAAAACAGTTGGCCAGGCATGTCTTGGCTCAGGTATGTCTTTAT3390.23029265509089428No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGACGCTATACCACACTACA3270.22214070269829628No Hit
CATAGAAGGACAAAGACATTTAGGACCCCATTGCTTCTTGTGGTAACTGG3210.2180647265019972No Hit
CATAGAGCTTGGGTGCGAACATCAACACACTGACGATCATTGTTCACTGC3180.21602673840384773No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGACCGGTCCCAACTGTCTCTGA3120.21195076220754872No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGCTATACCACACTACAC3070.20855411537729954No Hit
CATAGAGAAGACTCCCTCAACCCACCCTGACGATCATTGTTCACTGCAGC3060.2078747860112497No Hit
CATAGAGTCCAACTATTCCAGCACCACACTGTCATTGTCGCTGTCCCATC2870.19496752805630282No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGCTGAAGTGATGGGCTAGAT2660.18070161136925628No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGATGCTGAAGTGATGGGCTA2540.17254965897665822No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTCCTTCCCCACACCCTCTT2540.17254965897665822No Hit
CATAGAGTCCAACTATTCCAGCACCACACTGACGATCATTGTTCACTGCA2540.17254965897665822No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTGCTGAAGTGATGGGCTAG2530.1718703296106084No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCTACGCTATACCACACTA2480.16847368278035924No Hit
CATAGACAGTGCCTTTGTGCGTGTTACACTGACGACATGGCTCAGGTATG2480.16847368278035924No Hit
CATAGAACAGATGTTCTCCTTGTTTTCTATAACTTCTACAAAGGATTCTG2390.16235971848591071No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGTGGAAGGGTAAGAGAGGGTC2350.15964240102171137No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA2250.15284910736121302No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT2230.15149044862911332No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG2190.148773131164914No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC2160.1467351430667645No Hit
CATAGATGTGTAGCCTGGGTCTGACACCGTACCACGCTGTCCTTCTCTGA2060.13994184940626614No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACATACTGACGATCATTGTTCA2040.13858319067416647No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT2030.13790386130811663No Hit
CATAGACCAGCAGACACTCCCATCATACACTGGCTCAGGTATGTCTTTAT2000.13586587320996713No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGACGCTATACCACACTA1980.13450721447786745No Hit
CATAGACCAGCAGACACTCCCATCATGGTTCTACACATAGAGATCCCACC1980.13450721447786745No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGACGACATGGTTCTACACATAGAG1980.13450721447786745No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACCCACAGCCAGGAAAGAAT1960.13314855574576778No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGTGTAGGCTAATCTGAAATCT1880.1277139208173691No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG1830.1243172739871199No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGGCTCAGGTATGTCTTTA1800.1222792858889704No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCCAACTGTCTCTGAAAA1780.12092062715687074No Hit
CATAGAGAAGACTCCCTCAACCCACCAATGATGCTGAAGTGATGGGCTAG1750.11888263905872123No Hit
CATAGACGGATTATTCTCTCCATGGTCTGAGGAGAATTCAAGCTGCTCTA1740.1182033096926714No Hit
AAGGATTCTGGGCCATCTATGAGACCAAGTCTCTGCTACCGTAGTCCAGA1680.11412733349637239No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCAAATGATGCTGAAGTGA1640.11141001603217303No Hit
CATAGAAAGGTGCAATCAAGCCAGTTGTCTCATAGAGGCTAATCTGAAAT1630.11073068666612321No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT1610.10937202793402352No Hit
CATAGACCTCCGACAGTTTTTATGCACATCTTTTCTCAAACTGCTGGGGT1590.10801336920192386No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCTACACTGCCCTCTCTGC1590.10801336920192386No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGGAGACAGCCGCTCACCTCT1550.10529605173772451No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGACACTGACGCTATACCACA1550.10529605173772451No Hit
CATAGACTCATTGCACTTTCCACAACTGTGGTGGAAGGGTAAGAGAGGGT1510.10257873427352518No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)